JiaJia Dong
TitleCited byYear
Modeling translation in protein synthesis with TASEP: A tutorial and recent developments
RKP Zia, JJ Dong, B Schmittmann
Journal of Statistical Physics 144 (2), 405-428, 2011
1212011
Inhomogeneous exclusion processes with extended objects: The effect of defect locations
JJ Dong, B Schmittmann, RKP Zia
Physical Review E 76 (5), 051113, 2007
902007
Towards a model for protein production rates
JJ Dong, B Schmittmann, RKP Zia
Journal of Statistical Physics 128 (1), 21-34, 2007
782007
Probing the Mechanical Properties of Magnetosome chains in Living Magnetotactic Bacteria
DF A. Körnig, J.J. Dong, M. Bennet, M. Widdrat, J. Andert, F. D. Müller, D ...
Nano Letters 14 (8), 4653–4659, 201
35*201
On Ribosome Load, Codon Bias and Protein Abundance
S Klumpp, J Dong, T Hwa
Public Library of Science ONE, 2012
322012
Entrainment and unit velocity: Surprises in an accelerated exclusion process
J Dong, S Klumpp, RKP Zia
Phys Rev Lett 109, 130602, 2012
202012
Dynamic blockage in an exclusion process
M Sahoo, J Dong, S Klumpp
Journal of Physics A: Mathematical and Theoretical 48 (1), 015007, 2014
132014
Understanding the edge effect in TASEP with mean-field theoretic approaches
JJ Dong, RKP Zia, B Schmittmann
Journal of Physics A: Mathematical and Theoretical 42 (1), 015002, 2008
122008
Simulation of colony pattern formation under differential adhesion and cell proliferation
JJ Dong, S Klumpp
Soft Matter, 2018
52018
Mass transport perspective on an accelerated exclusion process: Analysis of augmented current and unit-velocity phases
J Dong, S Klumpp, RKP Zia
Physical Review E 87 (2), 022146, 2013
42013
Shorter exposures to harder X-rays trigger early apoptotic events in Xenopus laevis embryos
JJ Dong, SP Mury, KE Drahos, M Moscovitch, RKP Zia, CV Finkielstein
PloS one 5 (1), 2010
42010
Interplay between finite resources and a local defect in an asymmetric simple exclusion process
LJ Cook, JJ Dong, A LaFleur
Phys. Rev. E 88 (042127), 2013
32013
Inhomogeneous Totally Asymmetric Simple Exclusion Processes: Simulations, Theory and Application to Protein Synthesis
J Dong
Virginia Polytechnic Institute and State, 2008
32008
Estimating currents in totally asymmetric simple exclusion process with extended particles and inhomogeneous hopping rates.
RKP Zia, J Dong, B Schmittmann
Bulletin of the American Physical Society 54, 2009
12009
Modeling Colony Pattern Formation under Differential Adhesion and Cell Proliferation
JJ Dong, S Klumpp
Biophysical Journal 114 (3), 328a, 2018
2018
Spatial structures in a simple model of population dynamics for parasite-host interactions
JJ Dong, B Skinner, N Breecher, B Schmittmann, RKP Zia
Europhysics Letters 111, 48001, 2015
2015
Dynamic blockage in an exclusion process
J Dong, S Klumpp, M Sahoo
IOP Publishing, 2015
2015
Escaping an infestation of parasites by outrunning them: insights from a simple stochastic model
J Dong, B Skinner, N Breecher, B Schmittmann, RKP Zia
APS Meeting Abstracts, 2014
2014
Novel phases in an accelerated exclusion process
J Dong, S Klumpp, RKP Zia
Bulletin of the American Physical Society 58, 2013
2013
Study of the interactions of magnetosomes inside magnetotactic bacteria (MTB) through modeling and experimentation
J Dong, A Körnig, S Klumpp, D Faivre
APS March Meeting Abstracts, 2012
2012
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Articles 1–20