Thomas Thorne
Thomas Thorne
Lecturer in Computer Science, Reading University
Verified email at reading.ac.uk - Homepage
TitleCited byYear
Estimating the size of the human interactome
MPH Stumpf, T Thorne, E de Silva, R Stewart, HJ An, M Lappe, C Wiuf
Proceedings of the National Academy of Sciences 105 (19), 6959-6964, 2008
6792008
Model selection in systems and synthetic biology
P Kirk, T Thorne, MPH Stumpf
Current opinion in biotechnology 24 (4), 767-774, 2013
912013
The effects of incomplete protein interaction data on structural and evolutionary inferences
E de Silva, T Thorne, P Ingram, I Agrafioti, J Swire, C Wiuf, MPH Stumpf
BMC biology 4 (1), 39, 2006
792006
Combinatorial stresses kill pathogenic Candida species
D Kaloriti, A Tillmann, E Cook, M Jacobsen, T You, M Lenardon, L Ames, ...
Medical mycology 50 (7), 699-709, 2012
682012
Evolution at the system level: the natural history of protein interaction networks
MPH Stumpf, WP Kelly, T Thorne, C Wiuf
Trends in Ecology & Evolution 22 (7), 366-373, 2007
642007
The evolution of the phage shock protein response system: interplay between protein function, genomic organization, and system function
M Huvet, T Toni, X Sheng, T Thorne, G Jovanovic, C Engl, M Buck, ...
Molecular biology and evolution 28 (3), 1141-1155, 2010
532010
Considerate approaches to constructing summary statistics for ABC model selection
CP Barnes, S Filippi, MPH Stumpf, T Thorne
Statistics and Computing 22 (6), 1181-1197, 2012
472012
Calibrating spatio-temporal models of leukocyte dynamics against in vivo live-imaging data using approximate Bayesian computation
J Liepe, H Taylor, CP Barnes, M Huvet, L Bugeon, T Thorne, JR Lamb, ...
Integrative biology 4 (3), 335-345, 2012
322012
Parameter-free model discrimination criterion based on steady-state coplanarity
HA Harrington, KL Ho, T Thorne, MPH Stumpf
Proceedings of the National Academy of Sciences 109 (39), 15746-15751, 2012
292012
Inference of temporally varying Bayesian Networks
T Thorne, MPH Stumpf
Bioinformatics 28 (24), 3298-3305, 2012
242012
Graph spectral analysis of protein interaction network evolution
T Thorne, MPH Stumpf
Journal of The Royal Society Interface, rsif20120220, 2012
242012
Generating confidence intervals on biological networks
T Thorne, MPH Stumpf
BMC bioinformatics 8 (1), 467, 2007
242007
A systems biology analysis of long and short-term memories of osmotic stress adaptation in fungi
T You, P Ingram, MD Jacobsen, E Cook, A McDonagh, T Thorne, ...
BMC research notes 5 (1), 258, 2012
182012
Multi-model inference of network properties from incomplete data
MPH Stumpf, T Thorne
Journal of Integrative Bioinformatics 3 (2), 123-136, 2006
142006
Graphical modelling of molecular networks underlying sporadic inclusion body myositis
T Thorne, P Fratta, MG Hanna, A Cortese, V Plagnol, EM Fisher, ...
Molecular BioSystems 9 (7), 1736-1742, 2013
92013
Approximate inference of gene regulatory network models from RNA-Seq time series data
T Thorne
BMC bioinformatics 19 (1), 127, 2018
82018
Prediction of putative protein interactions through evolutionary analysis of osmotic stress response in the model yeast Saccharomyces cerevisae
TW Thorne, HL Ho, M Huvet, K Haynes, MPH Stumpf
Fungal genetics and biology 48 (5), 504-511, 2011
72011
Derivative processes for modelling metabolic fluxes
J Žurauskienė, P Kirk, T Thorne, J Pinney, M Stumpf
Bioinformatics 30 (13), 1892-1898, 2014
52014
Lipoprotein markers associated with disability from multiple sclerosis
AR Gafson, T Thorne, CIJ McKechnie, B Jimenez, R Nicholas, ...
Scientific reports 8 (1), 17026, 2018
32018
NetDiff–Bayesian model selection for differential gene regulatory network inference
T Thorne
Scientific reports 6, 39224, 2016
32016
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Articles 1–20