Jacob Cram
Jacob Cram
Horn Point Laboratory
Verified email at umces.edu - Homepage
Title
Cited by
Cited by
Year
Marine microbial community dynamics and their ecological interpretation
JA Fuhrman, JA Cram, DM Needham
Nature Reviews Microbiology 13 (3), 133-146, 2015
4112015
Correlation detection strategies in microbial data sets vary widely in sensitivity and precision
S Weiss, W Van Treuren, C Lozupone, K Faust, J Friedman, Y Deng, ...
The ISME journal 10 (7), 1669-1681, 2016
3952016
Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates
LC Xia, JA Steele, JA Cram, ZG Cardon, SL Simmons, JJ Vallino, ...
BMC systems biology 5 (2), 1-12, 2011
1602011
Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight
CET Chow, R Sachdeva, JA Cram, JA Steele, DM Needham, A Patel, ...
The ISME journal 7 (12), 2259-2273, 2013
1262013
Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years
JA Cram, CET Chow, R Sachdeva, DM Needham, AE Parada, JA Steele, ...
The ISME journal 9 (3), 563-580, 2015
1222015
Short-term observations of marine bacterial and viral communities: patterns, connections and resilience
DM Needham, CET Chow, JA Cram, R Sachdeva, A Parada, JA Fuhrman
The ISME journal 7 (7), 1274-1285, 2013
1142013
Accurate genome relative abundance estimation based on shotgun metagenomic reads
LC Xia, JA Cram, T Chen, JA Fuhrman, F Sun
PloS one 6 (12), e27992, 2011
1082011
Efficient statistical significance approximation for local similarity analysis of high-throughput time series data
LC Xia, D Ai, J Cram, JA Fuhrman, F Sun
Bioinformatics 29 (2), 230-237, 2013
1002013
Deep ocean nutrients imply large latitudinal variation in particle transfer efficiency
T Weber, JA Cram, SW Leung, T DeVries, C Deutsch
Proceedings of the National Academy of Sciences 113 (31), 8606-8611, 2016
762016
Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes
JA Cram, LC Xia, DM Needham, R Sachdeva, F Sun, JA Fuhrman
The ISME journal 9 (12), 2573-2586, 2015
522015
Dynamics and interactions of highly resolved marine plankton via automated high-frequency sampling
DM Needham, EB Fichot, E Wang, L Berdjeb, JA Cram, CG Fichot, ...
The ISME journal 12 (10), 2417-2432, 2018
382018
The role of particle size, ballast, temperature, and oxygen in the sinking flux to the deep sea
JA Cram, T Weber, SW Leung, AMP McDonnell, JH Liang, C Deutsch
Global Biogeochemical Cycles 32 (5), 858-876, 2018
342018
Dilution reveals how viral lysis and grazing shape microbial communities
JA Cram, AE Parada, JA Fuhrman
Limnology and Oceanography 61 (3), 889-905, 2016
222016
Statistical significance approximation in local trend analysis of high-throughput time-series data using the theory of Markov chains
LC Xia, D Ai, JA Cram, X Liang, JA Fuhrman, F Sun
BMC bioinformatics 16 (1), 1-14, 2015
92015
Vertical and seasonal patterns control bacterioplankton communities at two horizontally coherent coastal upwelling sites off galicia (NW Spain)
V Hernando-Morales, MM Varela, DM Needham, J Cram, JA Fuhrman, ...
Microbial ecology 76 (4), 866-884, 2018
72018
Utilizing gnotobiotic models to inform the role of the microbiome in vaccine response heterogeneity
JA Cram, KW Hager, JG Kublin
Current Opinion in HIV and AIDS 13 (1), 1-8, 2018
72018
Marine bacterial, archaeal and protistan association networks
JA Cram, F Sun, JA Fuhrman
Encyclopedia of Metagenomics, Springer Reference, 1-10, 2014
62014
Explore mediated co-varying dynamics in microbial community using integrated local similarity and liquid association analysis
D Ai, X Li, H Pan, J Chen, JA Cram, LC Xia
BMC genomics 20 (2), 117-128, 2019
42019
Human gut microbiota is associated with HIV-reactive immunoglobulin at baseline and following HIV vaccination
JA Cram, AJ Fiore-Gartland, S Srinivasan, S Karuna, G Pantaleo, ...
PloS one 14 (12), e0225622, 2019
32019
New insights into relationships between active and dormant organisms, phylogenetic diversity and ecosystem productivity
JA Cram
Molecular ecology 24 (23), 5767-5769, 2015
12015
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Articles 1–20