| Oncogenic signaling pathways in the cancer genome atlas F Sanchez-Vega, M Mina, J Armenia, WK Chatila, A Luna, KC La, ... Cell 173 (2), 321-337. e10, 2018 | 2418 | 2018 |
| Driver fusions and their implications in the development and treatment of human cancers Q Gao, WW Liang, SM Foltz, G Mutharasu, RG Jayasinghe, S Cao, ... Cell reports 23 (1), 227-238. e3, 2018 | 480 | 2018 |
| Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 444 | 2019 |
| ClonEvol: clonal ordering and visualization in cancer sequencing HX Dang, BS White, SM Foltz, CA Miller, J Luo, RC Fields, CA Maher Annals of oncology 28 (12), 3076-3082, 2017 | 141 | 2017 |
| Systematic discovery of complex insertions and deletions in human cancers K Ye, J Wang, R Jayasinghe, EW Lameijer, JF McMichael, J Ning, ... Nature medicine 22 (1), 97-104, 2016 | 118 | 2016 |
| Co-evolution of tumor and immune cells during progression of multiple myeloma R Liu, Q Gao, SM Foltz, JS Fowles, L Yao, JT Wang, S Cao, H Sun, ... Nature communications 12 (1), 2559, 2021 | 84 | 2021 |
| Proteogenomic characterization of ovarian HGSC implicates mitotic kinases, replication stress in observed chromosomal instability JE McDermott, OA Arshad, VA Petyuk, Y Fu, MA Gritsenko, TR Clauss, ... Cell reports medicine 1 (1), 2020 | 68 | 2020 |
| Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 180 (1), 207, 2020 | 52 | 2020 |
| Rare, low frequency and common coding variants in CHRNA5 and their contribution to nicotine dependence in European and African Americans E Olfson, NL Saccone, EO Johnson, LS Chen, R Culverhouse, K Doheny, ... Molecular psychiatry 21 (5), 601-607, 2016 | 49 | 2016 |
| Evolution and structure of clinically relevant gene fusions in multiple myeloma SM Foltz, Q Gao, CJ Yoon, H Sun, L Yao, Y Li, RG Jayasinghe, S Cao, ... Nature communications 11 (1), 2666, 2020 | 37 | 2020 |
| Geographic analysis of urologist density and prostate cancer mortality in the United States N Yao, SM Foltz, AY Odisho, DC Wheeler PloS one 10 (6), e0131578, 2015 | 24 | 2015 |
| Proteogenomic data and resources for pan-cancer analysis Y Li, Y Dou, FDV Leprevost, Y Geffen, AP Calinawan, F Aguet, Y Akiyama, ... Cancer cell 41 (8), 1397-1406, 2023 | 22 | 2023 |
| MIRMMR: binary classification of microsatellite instability using methylation and mutations SM Foltz, WW Liang, M Xie, L Ding Bioinformatics 33 (23), 3799-3801, 2017 | 22 | 2017 |
| Pan-cancer proteogenomics connects oncogenic drivers to functional states Y Li, E Porta-Pardo, C Tokheim, MH Bailey, TM Yaron, V Stathias, ... Cell 186 (18), 3921-3944. e25, 2023 | 18 | 2023 |
| Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation Y Geffen, S Anand, Y Akiyama, TM Yaron, Y Song, JL Johnson, ... Cell 186 (18), 3945-3967. e26, 2023 | 16 | 2023 |
| OpenPBTA: The Open Pediatric Brain Tumor Atlas JA Shapiro, KS Gaonkar, SJ Spielman, CL Savonen, CJ Bethell, R Jin, ... Cell genomics 3 (7), 2023 | 12* | 2023 |
| Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously SM Foltz, CS Greene, JN Taroni Communications Biology 6 (1), 222, 2023 | 9 | 2023 |
| Single-cell discovery and multiomic characterization of therapeutic targets in multiple myeloma L Yao, JT Wang, RG Jayasinghe, J O'Neal, CF Tsai, MP Rettig, Y Song, ... Cancer research 83 (8), 1214-1233, 2023 | 8 | 2023 |
| Integrative multi-omic cancer profiling reveals DNA methylation patterns associated with therapeutic vulnerability and cell-of-origin WW Liang, RJH Lu, RG Jayasinghe, SM Foltz, E Porta-Pardo, Y Geffen, ... Cancer cell 41 (9), 1567-1585. e7, 2023 | 7 | 2023 |
| OpenPBTA: an open pediatric brain tumor atlas JA Shapiro, KS Gaonkar, CL Savonen, SJ Spielman, CJ Bethell, R Jin, ... bioRxiv, 2022.09. 13.507832, 2022 | 6 | 2022 |
Reyka JayasingheWashington University in St. LouisVerified email at wustl.edu
