Daniel J. Gerhardt
Daniel J. Gerhardt
Invenra
Verified email at mater.uq.edu.au
TitleCited byYear
Somatic retrotransposition alters the genetic landscape of the human brain
JK Baillie, MW Barnett, KR Upton, DJ Gerhardt, TA Richmond, F De Sapio, ...
Nature 479 (7374), 534, 2011
5742011
Targeted RNA sequencing reveals the deep complexity of the human transcriptome
TR Mercer, DJ Gerhardt, ME Dinger, J Crawford, C Trapnell, JA Jeddeloh, ...
Nature biotechnology 30 (1), 99, 2012
3632012
Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma
R Shukla, KR Upton, M Muņoz-Lopez, DJ Gerhardt, ME Fisher, T Nguyen, ...
Cell 153 (1), 101-111, 2013
2672013
Ubiquitous L1 mosaicism in hippocampal neurons
KR Upton, DJ Gerhardt, JS Jesuadian, SR Richardson, ...
Cell 161 (2), 228-239, 2015
1872015
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond
M Mascher, TA Richmond, DJ Gerhardt, A Himmelbach, L Clissold, ...
The Plant Journal 76 (3), 494-505, 2013
1862013
Phenotypic and genomic analyses of a fast neutron mutant population resource in soybean
YT Bolon, WJ Haun, WW Xu, D Grant, MG Stacey, RT Nelson, ...
Plant physiology 156 (1), 240-253, 2011
1512011
Structural variants in the soybean genome localize to clusters of biotic stress-response genes
LK McHale, WJ Haun, WW Xu, PB Bhaskar, JE Anderson, DL Hyten, ...
Plant physiology 159 (4), 1295-1308, 2012
1422012
The composition and origins of genomic variation among individuals of the soybean reference cultivar Williams 82
WJ Haun, DL Hyten, WW Xu, DJ Gerhardt, TJ Albert, T Richmond, ...
Plant physiology 155 (2), 645-655, 2011
1262011
Targeted re‐sequencing of the allohexaploid wheat exome
MO Winfield, PA Wilkinson, AM Allen, GLA Barker, JA Coghill, A Burridge, ...
Plant biotechnology journal 10 (6), 733-742, 2012
1052012
Targeted sequencing for gene discovery and quantification using RNA CaptureSeq
TR Mercer, MB Clark, J Crawford, ME Brunck, DJ Gerhardt, RJ Taft, ...
Nature protocols 9 (5), 989, 2014
1002014
Mutation discovery in mice by whole exome sequencing
H Fairfield, GJ Gilbert, M Barter, RR Corrigan, M Curtain, Y Ding, ...
Genome biology 12 (9), R86, 2011
902011
Repeat subtraction‐mediated sequence capture from a complex genome
Y Fu, NM Springer, DJ Gerhardt, K Ying, CT Yeh, W Wu, ...
The Plant Journal 62 (5), 898-909, 2010
822010
Reprogramming triggers endogenous L1 and Alu retrotransposition in human induced pluripotent stem cells
S Klawitter, NV Fuchs, KR Upton, M Munoz-Lopez, R Shukla, J Wang, ...
Nature communications 7, 10286, 2016
812016
An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse
L Daxinger, SK Harten, H Oey, T Epp, L Isbel, E Huang, N Whitelaw, ...
Genome biology 14 (9), R96, 2013
462013
Heritable L1 retrotransposition in the mouse primordial germline and early embryo
SR Richardson, P Gerdes, DJ Gerhardt, FJ Sanchez-Luque, GO Bodea, ...
Genome research 27 (8), 1395-1405, 2017
332017
Genomic DNA enrichment using sequence capture microarrays: a novel approach to discover sequence nucleotide polymorphisms (SNP) in Brassica napus L
WE Clarke, IA Parkin, HA Gajardo, DJ Gerhardt, E Higgins, C Sidebottom, ...
PloS one 8 (12), e81992, 2013
332013
Nucleotide polymorphism and copy number variant detection using exome capture and next‐generation sequencing in the polyploid grass Panicum virgatum
J Evans, J Kim, KL Childs, B Vaillancourt, E Crisovan, A Nandety, ...
The plant journal 79 (6), 993-1008, 2014
282014
Changes in genome content generated via segregation of non‐allelic homologs
S Liu, K Ying, CT Yeh, J Yang, R Swanson‐Wagner, W Wu, T Richmond, ...
The Plant Journal 72 (3), 390-399, 2012
212012
L1 retrotransposition is a common feature of mammalian hepatocarcinogenesis
SN Schauer, PE Carreira, R Shukla, DJ Gerhardt, P Gerdes, ...
Genome research 28 (5), 639-653, 2018
162018
Evidence for L1-associated DNA rearrangements and negligible L1 retrotransposition in glioblastoma multiforme
PE Carreira, AD Ewing, G Li, SN Schauer, KR Upton, AC Fagg, S Morell, ...
Mobile DNA 7 (1), 21, 2016
132016
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