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Juw Won Park
Juw Won Park
Verified email at louisville.edu
Title
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Cited by
Year
rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data
S Shen, JW Park, Z Lu, L Lin, MD Henry, YN Wu, Q Zhou, Y Xing
Proceedings of the National Academy of Sciences 111 (51), E5593-E5601, 2014
18992014
Plant-derived exosomal microRNAs shape the gut microbiota
Y Teng, YI Ren, M Sayed, X Hu, C Lei, A Kumar, E Hutchins, J Mu, Z Deng, ...
Cell host & microbe 24 (5), 637-652. e8, 2018
5772018
MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data
S Shen, JW Park, J Huang, KA Dittmar, Z Lu, Q Zhou, RP Carstens, Y Xing
Nucleic acids research 40 (8), e61-e61, 2012
3632012
BS69/ZMYND11 reads and connects histone H3. 3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing
R Guo, L Zheng, JW Park, R Lv, H Chen, F Jiao, W Xu, S Mu, H Wen, ...
Molecular cell 56 (2), 298-310, 2014
2252014
Genetic engineering of a temperate phage-based delivery system for CRISPR/Cas9 antimicrobials against Staphylococcus aureus
JY Park, BY Moon, JW Park, JA Thornton, YH Park, KS Seo
Scientific reports 7 (1), 44929, 2017
1652017
Genome-wide determination of a broad ESRP-regulated posttranscriptional network by high-throughput sequencing
KA Dittmar, P Jiang, JW Park, K Amirikian, J Wan, S Shen, Y Xing, ...
Molecular and cellular biology 32 (8), 1468-1482, 2012
1462012
The splicing regulators Esrp1 and Esrp2 direct an epithelial splicing program essential for mammalian development
TW Bebee, JW Park, KI Sheridan, CC Warzecha, BW Cieply, AM Rohacek, ...
Elife 4, e08954, 2015
1372015
High-fat diet-induced upregulation of exosomal phosphatidylcholine contributes to insulin resistance
A Kumar, K Sundaram, J Mu, GW Dryden, MK Sriwastva, C Lei, L Zhang, ...
Nature communications 12 (1), 213, 2021
1292021
Determination of a comprehensive alternative splicing regulatory network and combinatorial regulation by key factors during the epithelial-to-mesenchymal transition
Y Yang, JW Park, TW Bebee, CC Warzecha, Y Guo, X Shang, Y Xing, ...
Molecular and cellular biology 36 (11), 1704-1719, 2016
1272016
HDAC inhibition impedes epithelial–mesenchymal plasticity and suppresses metastatic, castration-resistant prostate cancer
M Ruscetti, EL Dadashian, W Guo, B Quach, DJ Mulholland, JW Park, ...
Oncogene 35 (29), 3781-3795, 2016
1262016
Transcriptome sequencing reveals aberrant alternative splicing in Huntington's disease
L Lin, JW Park, S Ramachandran, Y Zhang, YT Tseng, S Shen, ...
Human molecular genetics 25 (16), 3454-3466, 2016
1092016
Plant-derived exosomal microRNAs inhibit lung inflammation induced by exosomes SARS-CoV-2 Nsp12
Y Teng, F Xu, X Zhang, J Mu, M Sayed, X Hu, C Lei, M Sriwastva, ...
Molecular Therapy 29 (8), 2424-2440, 2021
1082021
Plant-derived exosomal nanoparticles inhibit pathogenicity of Porphyromonas gingivalis
K Sundaram, DP Miller, A Kumar, Y Teng, M Sayed, J Mu, C Lei, ...
Iscience 21, 308-327, 2019
1022019
GLiMMPS: robust statistical model for regulatory variation of alternative splicing using RNA-seq data
K Zhao, Z Lu, JW Park, Q Zhou, Y Xing
Genome biology 14, 1-15, 2013
802013
Identifying differential alternative splicing events from RNA sequencing data using RNASeq-MATS
JW Park, C Tokheim, S Shen, Y Xing
Deep sequencing data analysis, 171-179, 2013
772013
Multiphasic and dynamic changes in alternative splicing during induction of pluripotency are coordinated by numerous RNA-binding proteins
B Cieply, JW Park, A Nakauka-Ddamba, TW Bebee, Y Guo, X Shang, ...
Cell reports 15 (2), 247-255, 2016
722016
Transcriptome-wide landscape of pre-mRNA alternative splicing associated with metastatic colonization
Z Lu, Q Huang, JW Park, S Shen, L Lin, CJ Tokheim, MD Henry, Y Xing
Molecular Cancer Research 13 (2), 305-318, 2015
702015
rMAPS: RNA map analysis and plotting server for alternative exon regulation
JW Park, S Jung, EC Rouchka, YT Tseng, Y Xing
Nucleic acids research 44 (W1), W333-W338, 2016
592016
Exosome‐like nanoparticles from Mulberry bark prevent DSS‐induced colitis via the AhR/COPS8 pathway
MK Sriwastva, ZB Deng, B Wang, Y Teng, A Kumar, K Sundaram, J Mu, ...
EMBO reports 23 (3), e53365, 2022
562022
circDeep: deep learning approach for circular RNA classification from other long non-coding RNA
M Chaabane, RM Williams, AT Stephens, JW Park
Bioinformatics 36 (1), 73-80, 2020
512020
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