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Michael P H Stumpf
Michael P H Stumpf
Professor of Theoretical Systems Biology, University of Melbourne
Verified email at unimelb.edu.au
Title
Cited by
Cited by
Year
Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems
T Toni, D Welch, N Strelkowa, A Ipsen, MPH Stumpf
Journal of the Royal Society Interface 6 (31), 187-202, 2009
14912009
Evolution of pathogenicity and sexual reproduction in eight Candida genomes
G Butler, MD Rasmussen, MF Lin, MAS Santos, S Sakthikumar, CA Munro, ...
Nature 459 (7247), 657-662, 2009
10462009
Estimating the size of the human interactome
MPH Stumpf, T Thorne, E De Silva, R Stewart, HJ An, M Lappe, C Wiuf
Proceedings of the National Academy of Sciences 105 (19), 6959-6964, 2008
8562008
Subnets of scale-free networks are not scale-free: sampling properties of networks
MPH Stumpf, C Wiuf, RM May
Proceedings of the National Academy of Sciences 102 (12), 4221-4224, 2005
6702005
Critical truths about power laws
MPH Stumpf, MA Porter
Science 335 (6069), 665-666, 2012
6372012
Balancing selection at the prion protein gene consistent with prehistoric kurulike epidemics
S Mead, MPH Stumpf, J Whitfield, JA Beck, M Poulter, T Campbell, ...
Science 300 (5619), 640-643, 2003
4482003
A large fraction of HLA class I ligands are proteasome-generated spliced peptides
J Liepe, F Marino, J Sidney, A Jeko, DE Bunting, A Sette, PM Kloetzel, ...
Science 354 (6310), 354-358, 2016
3882016
Network motifs: structure does not determine function
PJ Ingram, MPH Stumpf, J Stark
BMC genomics 7 (1), 1-12, 2006
3332006
Simulation-based model selection for dynamical systems in systems and population biology
T Toni, MPH Stumpf
Bioinformatics 26 (1), 104-110, 2010
3012010
Gene regulatory network inference from single-cell data using multivariate information measures
TE Chan, MPH Stumpf, AC Babtie
Cell systems 5 (3), 251-267. e3, 2017
2792017
A predominantly indigenous paternal heritage for the Austronesian-speaking peoples of insular Southeast Asia and Oceania
C Capelli, JF Wilson, M Richards, MPH Stumpf, F Gratrix, S Oppenheimer, ...
The American Journal of Human Genetics 68 (2), 432-443, 2001
2592001
Estimating recombination rates from population-genetic data
MPH Stumpf, GAT McVean
Nature Reviews Genetics 4 (12), 959-968, 2003
2572003
AY chromosome census of the British Isles
C Capelli, N Redhead, JK Abernethy, F Gratrix, JF Wilson, T Moen, ...
Current Biology 13 (11), 979-984, 2003
2402003
Managing membrane stress: the phage shock protein (Psp) response, from molecular mechanisms to physiology
N Joly, C Engl, G Jovanovic, M Huvet, T Toni, X Sheng, MPH Stumpf, ...
FEMS microbiology reviews 34 (5), 797-827, 2010
2312010
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation
J Liepe, P Kirk, S Filippi, T Toni, CP Barnes, MPH Stumpf
Nature protocols 9 (2), 439-456, 2014
2172014
Sensitivity, robustness, and identifiability in stochastic chemical kinetics models
M Komorowski, MJ Costa, DA Rand, MPH Stumpf
Proceedings of the National Academy of Sciences 108 (21), 8645-8650, 2011
2162011
Phylogenetic diversity of stress signalling pathways in fungi
E Nikolaou, I Agrafioti, M Stumpf, J Quinn, I Stansfield, AJP Brown
BMC Evolutionary Biology 9 (1), 1-18, 2009
2092009
Statistical inference of the time-varying structure of gene-regulation networks
S Lebre, J Becq, F Devaux, MPH Stumpf, G Lelandais
BMC systems biology 4 (1), 1-16, 2010
1902010
Maximizing the information content of experiments in systems biology
J Liepe, S Filippi, M Komorowski, MPH Stumpf
PLoS computational biology 9 (1), e1002888, 2013
1882013
ABC-SysBio—approximate Bayesian computation in Python with GPU support
J Liepe, C Barnes, E Cule, K Erguler, P Kirk, T Toni, MPH Stumpf
Bioinformatics 26 (14), 1797-1799, 2010
1772010
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