Adrien Coulet
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Using text to build semantic networks for pharmacogenomics
A Coulet, NH Shah, Y Garten, M Musen, RB Altman
Journal of biomedical informatics 43 (6), 1009-1019, 2010
NCBO Resource Index: Ontology-based search and mining of biomedical resources
C Jonquet, P LePendu, S Falconer, A Coulet, NF Noy, MA Musen, ...
Journal of Web Semantics 9 (3), 316-324, 2011
Recent progress in automatically extracting information from the pharmacogenomic literature
Y Garten, A Coulet, RB Altman
Pharmacogenomics 11 (10), 1467-1489, 2010
Atherosclerotic cardiovascular disease risk prediction in disaggregated Asian and Hispanic subgroups using electronic health records
F Rodriguez, S Chung, MR Blum, A Coulet, S Basu, LP Palaniappan
Journal of the American Heart Association 8 (14), e011874, 2019
Creating fair models of atherosclerotic cardiovascular disease risk
S Pfohl, B Marafino, A Coulet, F Rodriguez, L Palaniappan, NH Shah
Proceedings of the 2019 AAAI/ACM Conference on AI, Ethics, and Society, 271-278, 2019
Results of the ontology alignment evaluation initiative 2020
MAN Pour, A Algergawy, R Amini, D Faria, I Fundulaki, I Harrow, ...
15th International Workshop on Ontology Matching (OM 2020) 2788, 92-138, 2020
Integration and publication of heterogeneous text-mined relationships on the Semantic Web
A Coulet, Y Garten, M Dumontier, RB Altman, MA Musen, NH Shah
Journal of biomedical semantics 2, 1-16, 2011
BioPortal: Ontologies and Integrated Data Resources at the Click of the Mouse
PL Whetzel, NH Shah, NF Noy, B Dai, M Dorf, N Griffith, C Jonquet, ...
1st International Conference on Biomedical Ontology (ICBO 2009), Poster …, 2009
Method and system for extraction and normalization of relationships via ontology induction
A Coulet, NH Shah, Y Garten, M Musen, RB Altman
US Patent 10,025,774, 2018
PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison
P Monnin, J Legrand, G Husson, P Ringot, A Tchechmedjiev, C Jonquet, ...
BMC bioinformatics 20, 1-16, 2019
Suggested ontology for pharmacogenomics (SO-Pharm): modular construction and preliminary testing
A Coulet, M Smaïl-Tabbone, A Napoli, MD Devignes
OTM Confederated International Conferences" On the Move to Meaningful …, 2006
Ontology-guided data preparation for discovering genotype-phenotype relationships
A Coulet, M Smaïl-Tabbone, P Benlian, A Napoli, MD Devignes
BMC bioinformatics 9, 1-9, 2008
PGxCorpus, a manually annotated corpus for pharmacogenomics
J Legrand, R Gogdemir, C Bousquet, K Dalleau, MD Devignes, W Digan, ...
Scientific data 7 (1), 3, 2020
Using pattern structures for analyzing ontology-based annotations of biomedical data
A Coulet, F Domenach, M Kaytoue, A Napoli
International Conference on Formal Concept Analysis, 76-91, 2013
Semantically enabling pharmacogenomic data for the realization of personalized medicine
M Samwald, A Coulet, I Huerga, RL Powers, JS Luciano, RR Freimuth, ...
Pharmacogenomics 13 (2), 201-212, 2012
Extracting disease-symptom relationships by learning syntactic patterns from dependency graphs
M Hassan, O Makkaoui, A Coulet, Y Toussaint
BioNLP 15, 184, 2015
Syntax-based transfer learning for the task of biomedical relation extraction
J Legrand, Y Toussaint, C Raïssi, A Coulet
Journal of Biomedical Semantics 12, 1-11, 2021
SNP-Converter: An ontology-based solution to reconcile heterogeneous SNP descriptions for pharmacogenomic studies
A Coulet, M Smaïl-Tabbone, P Benlian, A Napoli, MD Devignes
International Workshop on Data Integration in the Life Sciences, 82-93, 2006
Investigating ADR mechanisms with explainable AI: a feasibility study with knowledge graph mining
E Bresso, P Monnin, C Bousquet, FÉ Calvier, NC Ndiaye, N Petitpain, ...
BMC medical informatics and decision making 21 (1), 171, 2021
Discovering associations between adverse drug events using pattern structures and ontologies
G Personeni, E Bresso, MD Devignes, M Dumontier, M Smaïl-Tabbone, ...
Journal of biomedical semantics 8, 1-13, 2017
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