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Rachael Skyner
Rachael Skyner
Omass Therapeutics
Verified email at omass.com
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Year
A review of methods for the calculation of solution free energies and the modelling of systems in solution
RE Skyner, JL McDonagh, CR Groom, T van Mourik, JBO Mitchell
Physical Chemistry Chemical Physics 17 (9), 6174-6191, 2015
5172015
Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease
A Douangamath, D Fearon, P Gehrtz, T Krojer, P Lukacik, CD Owen, ...
Nature communications 11 (1), 5047, 2020
4332020
SARS-CoV-2 infects the human kidney and drives fibrosis in kidney organoids
J Jansen, KC Reimer, JS Nagai, FS Varghese, GJ Overheul, M de Beer, ...
Cell Stem Cell 29 (2), 217-231. e8, 2022
1712022
Structure, mechanism and crystallographic fragment screening of the SARS-CoV-2 NSP13 helicase
JA Newman, A Douangamath, S Yadzani, Y Yosaatmadja, A Aimon, ...
Nature communications 12 (1), 4848, 2021
1542021
Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking
M Schuller, GJ Correy, S Gahbauer, D Fearon, T Wu, RE Díaz, ID Young, ...
Science advances 7 (16), eabf8711, 2021
1272021
COVID moonshot: open science discovery of SARS-CoV-2 main protease inhibitors by combining crowdsourcing, high-throughput experiments, computational simulations, and machine …
H Achdout, A Aimon, E Bar-David, GM Morris
BioRxiv, 2020
532020
Open Science Discovery of Potent Non-Covalent SARS-CoV-2 Main Protease Inhibitors
COVID Moonshot Consortium, H Achdout, A Aimon, DS Alonzi, R Arbon, ...
BioRxiv, 2020.10. 29.339317, 2020
362020
Achieving efficient fragment screening at XChem facility at diamond light source
A Douangamath, A Powell, D Fearon, PM Collins, R Talon, T Krojer, ...
JoVE (Journal of Visualized Experiments), e62414, 2021
322021
Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors
ML Boby, D Fearon, M Ferla, M Filep, L Koekemoer, MC Robinson, ...
Science 382 (6671), eabo7201, 2023
232023
Fragment libraries designed to be functionally diverse recover protein binding information more efficiently than standard structurally diverse libraries
A Carbery, R Skyner, F von Delft, CM Deane
Journal of Medicinal Chemistry 65 (16), 11404-11413, 2022
192022
Building multi-component crystals from cations and co-crystals: the use of chaperones
S Bukenya, T Munshi, IJ Scowen, R Skyner, DA Whitaker, CC Seaton
CrystEngComm 15 (12), 2241-2250, 2013
132013
Probing the average distribution of water in organic hydrate crystal structures with radial distribution functions (RDFs)
RE Skyner, JBO Mitchell, CR Groom
CrystEngComm 19 (4), 641-652, 2017
122017
PanDDA analysis group deposition of SARS-CoV-2 mainprotease fragment screen
D Fearon, CD Owen, A Douangamath, P Lukacik, AJ Powell, ...
Nat. Commun 11, 5047, 2020
112020
Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease, Nat. Commun., 11, 5047
A Douangamath, D Fearon, P Gehrtz, T Krojer, P Lukacik, CD Owen, ...
72020
Allosteric regulation and crystallographic fragment screening of SARS-CoV-2 NSP15 endoribonuclease
AS Godoy, AM Nakamura, A Douangamath, Y Song, GD Noske, ...
Nucleic Acids Research 51 (10), 5255-5270, 2023
62023
Galaxy workflows for fragment-based virtual screening: a case study on the SARS-CoV-2 main protease
S Bray, T Dudgeon, R Skyner, R Backofen, B Grüning, F von Delft
Journal of cheminformatics 14 (1), 22, 2022
42022
In silico methods to predict solubility
JL McDonagh, JBO Mitchell, DS Palmer, RE Skyner
Solubility in Pharmaceutical Chemistry, 71, 2020
42020
Learnt representations of proteins can be used for accurate prediction of small molecule binding sites on experimentally determined and predicted protein structures
A Carbery, M Buttenschoen, R Skyner, F von Delft, CM Deane
Journal of Cheminformatics 16 (1), 32, 2024
32024
Experiences from developing software for large X-ray crystallography-driven protein-ligand studies
NM Pearce, R Skyner, T Krojer
Frontiers in Molecular Biosciences 9, 861491, 2022
22022
Fragmenstein: predicting protein-ligand structures of compounds derived from known crystallographic fragment hits using a strict conserved-binding–based methodology
MP Ferla, R Sánchez-García, RE Skyner, S Gahbauer, JC Taylor, ...
2024
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