David Andrew Eccles
David Andrew Eccles
Bioinformatics Research Analyst, Gringene Bioinformatics
Verified email at gringene.org
TitleCited byYear
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
BJ Haas, A Papanicolaou, M Yassour, M Grabherr, PD Blood, J Bowden, ...
Nature protocols 8 (8), 1494, 2013
32302013
Predicting protein structures with a multiplayer online game
S Cooper, F Khatib, A Treuille, J Barbero, J Lee, M Beenen, A Leaver-Fay, ...
Nature 466 (7307), 756, 2010
12252010
Mitochondrial Genome Acquisition Restores Respiratory Function and Tumorigenic Potential of Cancer Cells without Mitochondrial DNA
AS Tan, JW Baty, LF Dong, A Bezawork-Geleta, B Endaya, J Goodwin, ...
Cell metabolism 21 (1), 81-94, 2015
3102015
MinION Analysis and Reference Consortium: Phase 1 data release and analysis
CLC Ip, M Loose, JR Tyson, M de Cesare, BL Brown, M Jain, RM Leggett, ...
F1000Research 4, 2015
1762015
An analysis of DNA methylation in human adipose tissue reveals differential modification of obesity genes before and after gastric bypass and weight loss
MC Benton, A Johnstone, D Eccles, B Harmon, MT Hayes, RA Lea, ...
Genome biology 16 (1), 8, 2015
1412015
Metastatic susceptibility locus, an 8p hot-spot for tumour progression disrupted in colorectal liver metastases: 13 candidate genes examined at the DNA, mRNA and protein level
DP Macartney-Coxson, KA Hood, H Shi, T Ward, A Wiles, R O'Connor, ...
BMC cancer 8 (1), 187, 2008
792008
MinION nanopore sequencing of an influenza genome
J Wang, NE Moore, YM Deng, DA Eccles, RJ Hall
Frontiers in microbiology 6, 766, 2015
622015
β-Catenin-Dependent Control of Positional Information along the AP Body Axis in Planarians Involves a Teashirt Family Member
H Reuter, M März, MC Vogg, D Eccles, L Grífol-Boldú, D Wehner, ...
Cell reports 10 (2), 253-265, 2015
432015
Testing the thrifty gene hypothesis: the Gly482Ser variant in PPARGC1A is associated with BMI in Tongans
S Myles, RA Lea, J Ohashi, GK Chambers, JG Weiss, E Hardouin, ...
BMC medical genetics 12 (1), 10, 2011
432011
MinION analysis and reference consortium: phase 2 data release and analysis of R9. 0 chemistry
M Jain, JR Tyson, M Loose, CLC Ip, DA Eccles, J O'Grady, S Malla, ...
F1000Research 6, 2017
402017
Complete mitochondrial genome sequencing reveals novel haplotypes in a Polynesian population
M Benton, D Macartney-Coxson, D Eccles, L Griffiths, G Chambers, R Lea
PloS one 7 (4), e35026, 2012
372012
Th2 responses are primed by skin dendritic cells with distinct transcriptional profiles
LM Connor, SC Tang, E Cognard, S Ochiai, KL Hilligan, SI Old, ...
Journal of Experimental Medicine 214 (1), 125-142, 2017
292017
The p. Ala510Val mutation in the SPG7 (paraplegin) gene is the most common mutation causing adult onset neurogenetic disease in patients of British ancestry
RH Roxburgh, R Marquis-Nicholson, F Ashton, AM George, RA Lea, ...
Journal of neurology 260 (5), 1286-1294, 2013
272013
Mapping eQTLs in the Norfolk Island Genetic Isolate Identifies Candidate Genes for CVD Risk Traits
MC Benton, RA Lea, D Macartney-Coxson, MA Carless, HH Göring, ...
The American Journal of Human Genetics 93 (6), 1087-1099, 2013
212013
Tracking the evolutionary history of the warrior gene in the South Pacific
D Hall, M Green, G Chambers, R Lea
11th International Human Genetics Meeting, Brisbane, Australia, 6-10, 2006
162006
Investigation of chimeric reads using the MinION
R White, C Pellefigues, F Ronchese, O Lamiable, D Eccles
F1000Research 6, 2017
112017
‘Mutiny on the Bounty’: the genetic history of Norfolk Island reveals extreme gender-biased admixture
MC Benton, S Stuart, C Bellis, D Macartney-Coxson, D Eccles, JE Curran, ...
Investigative genetics 6 (1), 11, 2015
102015
Annotated mitochondrial genome with Nanopore R9 signal for Nippostrongylus brasiliensis
J Chandler, M Camberis, T Bouchery, M Blaxter, G Le Gros, DA Eccles
F1000Research 6, 2017
82017
Harnessing the MinION: An example of how to establish long‐read sequencing in a laboratory using challenging plant tissue from Eucalyptus pauciflora
M Schalamun, R Nagar, D Kainer, E Beavan, D Eccles, JP Rathjen, ...
Molecular ecology resources 19 (1), 77-89, 2019
72019
De novo assembly of the complex genome of Nippostrongylus brasiliensis using MinION long reads
D Eccles, J Chandler, M Camberis, B Henrissat, S Koren, G Le Gros, ...
BMC Biology 16 (1), 6, 2018
72018
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