Mary Shimoyama
Title
Cited by
Cited by
Year
The gene ontology resource: 20 years and still GOing strong
Gene Ontology Consortium
Nucleic acids research 47 (D1), D330-D338, 2019
8812019
The gene ontology (GO) project in 2006
Gene Ontology Consortium
Nucleic acids research 34 (suppl_1), D322-D326, 2006
6242006
The gene ontology project in 2008
Gene Ontology Consortium
Nucleic acids research 36 (suppl_1), D440-D444, 2008
590*2008
Gene Ontology annotations and resources
Gene Ontology Consortium
Nucleic acids research 41 (D1), D530-D535, 2012
4322012
The Gene Ontology in 2010: extensions and refinements
Gene Ontology Consortium
Nucleic acids research 38 (suppl_1), D331-D335, 2010
4162010
Integrative annotation of 21,037 human genes validated by full-length cDNA clones
T Imanishi, T Itoh, Y Suzuki, C O'donovan, S Fukuchi, KO Koyanagi, ...
PLoS Biol 2 (6), e162, 2004
4102004
The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease
M Shimoyama, J De Pons, GT Hayman, SJF Laulederkind, W Liu, ...
Nucleic acids research 43 (D1), D743-D750, 2015
2052015
The Rat Genome Database, update 2007—easing the path from disease to data and back again
SN Twigger, M Shimoyama, S Bromberg, AE Kwitek, HJ Jacob, ...
Nucleic acids research 35 (suppl_1), D658-D662, 2007
1522007
Expansion of the Gene Ontology knowledgebase and resources
S Carbon, H Dietze, SE Lewis, CJ Mungall, MC Munoz-Torres, S Basu, ...
Nucleic Acids Research 45 (D1), 2017
1252017
Rat Genome Database (RGD): mapping disease onto the genome
S Twigger, J Lu, M Shimoyama, D Chen, D Pasko, H Long, J Ginster, ...
Nucleic acids research 30 (1), 125-128, 2002
1142002
Genomics in clinical practice: lessons from the front lines
HJ Jacob, K Abrams, DP Bick, K Brodie, DP Dimmock, M Farrell, J Geurts, ...
Science translational medicine 5 (194), 194cm5-194cm5, 2013
942013
The Rat Genome Database 2009: variation, ontologies and pathways
MR Dwinell, EA Worthey, M Shimoyama, B Bakir-Gungor, J DePons, ...
Nucleic acids research 37 (suppl_1), D744-D749, 2009
842009
The Rat Genome Database 2013—data, tools and users
SJF Laulederkind, GT Hayman, SJ Wang, JR Smith, TF Lowry, R Nigam, ...
Briefings in bioinformatics 14 (4), 520-526, 2013
832013
The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts
Genome Information Integration Project And H-Invitational 2
Nucleic acids research 36 (suppl_1), D793-D799, 2007
732007
The Rat Genome Database (RGD): developments towards a phenome database
N De La Cruz, S Bromberg, D Pasko, M Shimoyama, S Twigger, J Chen, ...
Nucleic acids research 33 (suppl_1), D485-D491, 2005
632005
The gene ontology (GO) project in 2006
MA Harris, JI Clark, A Ireland, J Lomax, M Ashburner, R Collins, K Eilbeck, ...
Nucleic Acids Research 34, D322-D326, 2006
552006
A revised nomenclature for the human and rodent α-tubulin gene family
VK Khodiyar, LJ Maltais, KMB Sneddon, JR Smith, M Shimoyama, ...
Genomics 90 (2), 285-289, 2007
542007
Multiscale modeling and data integration in the virtual physiological rat project
DA Beard, ML Neal, N Tabesh-Saleki, CT Thompson, JB Bassingtwaighte, ...
Annals of biomedical engineering 40 (11), 2365-2378, 2012
502012
Three ontologies to define phenotype measurement data
M Shimoyama, R Nigam, LS McIntosh, R Nagarajan, TK Rice, DC Rao, ...
Frontiers in genetics 3, 87, 2012
502012
The pathway ontology–updates and applications
V Petri, P Jayaraman, M Tutaj, GT Hayman, JR Smith, J De Pons, ...
Journal of biomedical semantics 5 (1), 7, 2014
482014
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Articles 1–20