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Joshua T Berryman
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Deciphering drift time measurements from travelling wave ion mobility spectrometry-mass spectrometry studies
DP Smith, TW Knapman, I Campuzano, RW Malham, JT Berryman, ...
European journal of mass spectrometry 15 (2), 113-130, 2009
4102009
AMBER 14; University of California: San Francisco, 2014
DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ...
Google Scholar There is no corresponding record for this reference, 1-826, 2014
2372014
AMBER 14. 2014
DA Case, V Babin, J Berryman, RM Betz, Q Cai, DS Cerutti, ...
University of California, San Francisco, 2014
1112014
Considerations in experimental and theoretical collision cross-section measurements of small molecules using travelling wave ion mobility spectrometry-mass spectrometry
TW Knapman, JT Berryman, I Campuzano, SA Harris, AE Ashcroft
International journal of mass spectrometry 298 (1-3), 17-23, 2010
1082010
Competition between crystal and fibril formation in molecular mutations of amyloidogenic peptides
NP Reynolds, J Adamcik, JT Berryman, S Handschin, AAH Zanjani, W Li, ...
Nature communications 8 (1), 1338, 2017
1002017
ILQINS hexapeptide, identified in lysozyme left-handed helical ribbons and nanotubes, forms right-handed helical ribbons and crystals
C Lara, NP Reynolds, JT Berryman, A Xu, A Zhang, R Mezzenga
Journal of the American Chemical Society 136 (12), 4732-4739, 2014
902014
Crystal nucleation mechanism in melts of short polymer chains under quiescent conditions and under shear flow
M Anwar, JT Berryman, T Schilling
The Journal of Chemical Physics 141 (12), 2014
642014
Neurotoxic amyloidogenic peptides in the proteome of SARS-COV2: potential implications for neurological symptoms in COVID-19
M Charnley, S Islam, GK Bindra, J Engwirda, J Ratcliffe, J Zhou, ...
Nature communications 13 (1), 3387, 2022
582022
Systematic examination of polymorphism in amyloid fibrils by molecular-dynamics simulation
JT Berryman, SE Radford, SA Harris
Biophysical journal 100 (9), 2234-2242, 2011
582011
Thermodynamic description of polymorphism in Q-and N-rich peptide aggregates revealed by atomistic simulation
JT Berryman, SE Radford, SA Harris
Biophysical journal 97 (1), 1-11, 2009
582009
Sampling rare events in nonequilibrium and nonstationary systems
JT Berryman, T Schilling
The Journal of chemical physics 133 (24), 2010
572010
TE, Darden, TA, Duke, RE, Giese, TJ, Gohlke, H., Goetz, AW, et al
DA Case, JT Berryman, RM Betz, DS Cerutti, I Cheatham
Amber, 2015
36*2015
Walker
DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ...
Wang, J, 18
2918
The early crystal nucleation process in hard spheres shows synchronised ordering and densification
JT Berryman, M Anwar, S Dorosz, T Schilling
The Journal of chemical physics 145 (21), 2016
252016
The flexible rare event sampling harness system (freshs)
K Kratzer, JT Berryman, A Taudt, J Zeman, A Arnold
Computer Physics Communications 185 (7), 1875-1885, 2014
242014
Evolution of conformation, nanomechanics, and infrared nanospectroscopy of single amyloid fibrils converting into microcrystals
J Adamcik, FS Ruggeri, JT Berryman, A Zhang, TPJ Knowles, ...
Advanced Science 8 (2), 2002182, 2021
212021
Amyloid evolution: antiparallel replaced by parallel
AAH Zanjani, NP Reynolds, A Zhang, T Schilling, R Mezzenga, ...
Biophysical journal 118 (10), 2526-2536, 2020
202020
First-principles modeling of chemistry in mixed solvents: Where to go from here?
AM Maldonado, Y Basdogan, JT Berryman, SB Rempe, JA Keith
The Journal of Chemical Physics 152 (13), 2020
162020
DNA partitions into triplets under tension in the presence of organic cations, with sequence evolutionary age predicting the stability of the triplet phase
A Taghavi, P van der Schoot, JT Berryman
Quarterly reviews of biophysics 50, e15, 2017
142017
Free energies by thermodynamic integration relative to an exact solution, used to find the handedness-switching salt concentration for DNA
JT Berryman, T Schilling
Journal of chemical theory and computation 9 (1), 679-686, 2013
102013
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Articles 1–20