Julie Aspden
Julie Aspden
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Cited by
Extensive translation of small open reading frames revealed by Poly-Ribo-Seq
JL Aspden, YC Eyre-Walker, RJ Phillips, U Amin, MAS Mumtaz, ...
elife 3, e03528, 2014
The Prp19 complex and the Usp4Sart3 deubiquitinating enzyme control reversible ubiquitination at the spliceosome
EJ Song, SL Werner, J Neubauer, F Stegmeier, J Aspden, D Rio, ...
Genes & development 24 (13), 1434-1447, 2010
Long non‐coding RNAs in development and disease: conservation to mechanisms
I Tsagakis, K Douka, I Birds, JL Aspden
The Journal of pathology 250 (5), 480-495, 2020
Two new and distinct roles for Drosophila Argonaute-2 in the nucleus: alternative pre-mRNA splicing and transcriptional repression
JM Taliaferro, JL Aspden, T Bradley, D Marwha, M Blanchette, DC Rio
Genes & development 27 (4), 378-389, 2013
Standardized annotation of translated open reading frames
JM Mudge, J Ruiz-Orera, JR Prensner, MA Brunet, F Calvet, I Jungreis, ...
Nature biotechnology 40 (7), 994-999, 2022
Ribosome heterogeneity and specialization in development
K Norris, T Hopes, JL Aspden
Wiley interdisciplinary reviews: RNA 12 (4), e1644, 2021
The RNA-binding protein ELAV regulates Hox RNA processing, expression and function within the Drosophila nervous system
A Rogulja-Ortmann, J Picao-Osorio, C Villava, P Patraquim, E Lafuente, ...
Development 141 (10), 2046-2056, 2014
Developmental regulation of canonical and small ORF translation from mRNAs
P Patraquim, MAS Mumtaz, JI Pueyo, JL Aspden, JP Couso
Genome biology 21 (1), 1-26, 2020
Ribosome fingerprinting with a solid-state nanopore
M Raveendran, AR Leach, T Hopes, JL Aspden, P Actis
ACS sensors 5 (11), 3533-3539, 2020
Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching
T Hopes, K Norris, M Agapiou, CGP McCarthy, PA Lewis, MJ O’Connell, ...
Nucleic acids research 50 (4), 2240-2257, 2022
Identification and experimental validation of splicing regulatory elements in Drosophila melanogaster reveals functionally conserved splicing enhancers in metazoans
AN Brooks, JL Aspden, AI Podgornaia, DC Rio, SE Brenner
Rna 17 (10), 1884-1894, 2011
Cytoplasmic long noncoding RNAs are differentially regulated and translated during human neuronal differentiation
K Douka, I Birds, D Wang, A Kosteletos, S Clayton, A Byford, ...
Rna 27 (9), 1082-1101, 2021
A segmental genomic duplication generates a functional intron
U Hellsten, JL Aspden, DC Rio, DS Rokhsar
Nature communications 2 (1), 454, 2011
Gene Fusions derived by transcriptional readthrough are Driven by Segmental Duplication in Human
AM McCartney, EM Hyland, P Cormican, RJ Moran, AE Webb, KD Lee, ...
Genome biology and evolution 11 (9), 2678-2690, 2019
Differential effects of nucleotide analogs on scanning-dependent initiation and elongation of mammalian mRNA translation in vitro
JL Aspden, RJ Jackson
RNA 16 (6), 1130-1137, 2010
Optimization of ribosome footprinting conditions for Ribo-Seq in human and Drosophila melanogaster tissue culture cells
K Douka, M Agapiou, I Birds, JL Aspden
Frontiers in Molecular Biosciences 8, 791455, 2022
Not all exons are protein coding: Addressing a common misconception
JL Aspden, EWJ Wallace, N Whiffin
Cell Genomics 3 (4), 2023
Kaposi’s sarcoma-associated herpesvirus induces specialised ribosomes to efficiently translate viral lytic mRNAs
JC Murphy, EM Harrington, S Schumann, EJR Vasconcelos, TJ Mottram, ...
Nature Communications 14 (1), 300, 2023
The Drosophila splicing factor PSI is phosphorylated by casein kinase II and tousled-like kinase
JM Taliaferro, D Marwha, JL Aspden, D Mavrici, NE Cheng, LA Kohlstaedt, ...
PloS one 8 (2), e56401, 2013
m6A Regulates the Stability of Cellular Transcripts Required for Efficient KSHV Lytic Replication
O Manners, B Baquero-Perez, TJ Mottram, ID Yonchev, CJ Trevelyan, ...
Viruses 15 (6), 1381, 2023
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