| Finding alternatives to antibiotics HK Allen, J Trachsel, T Casey, T Looft Ann. NY Acad. Sci 40, 1-10, 2014 | 293 | 2014 |
| Meta-analysis to define a core microbiota in the swine gut DB Holman, BW Brunelle, J Trachsel, HK Allen MSystems 2 (3), 10.1128/msystems. 00004-17, 2017 | 235* | 2017 |
| Pipeline for amplifying and analyzing amplicons of the V1–V3 region of the 16S rRNA gene HK Allen, DO Bayles, T Looft, J Trachsel, BE Bass, DP Alt, SMD Bearson, ... BMC research notes 9, 1-6, 2016 | 69 | 2016 |
| Dietary resistant potato starch alters intestinal microbial communities and their metabolites, and markers of immune regulation and barrier function in swine J Trachsel, C Briggs, NK Gabler, HK Allen, CL Loving Frontiers in immunology 10, 1381, 2019 | 57 | 2019 |
| Evaluating nursery pig responses to in-feed sub-therapeutic antibiotics ET Helm, S Curry, JM Trachsel, M Schroyen, NK Gabler PLoS One 14 (4), e0216070, 2019 | 51 | 2019 |
| Toward antibiotic stewardship: route of antibiotic administration impacts the microbiota and resistance gene diversity in swine feces N Ricker, J Trachsel, P Colgan, J Jones, J Choi, J Lee, JF Coetzee, ... Frontiers in veterinary science 7, 255, 2020 | 33 | 2020 |
| Function and phylogeny of bacterial butyryl coenzyme a: acetate transferases and their diversity in the proximal colon of swine J Trachsel, DO Bayles, T Looft, UY Levine, HK Allen Applied and environmental microbiology 82 (22), 6788-6798, 2016 | 29 | 2016 |
| Butyricicoccus porcorum sp. nov., a butyrate-producing bacterium from swine intestinal tract J Trachsel, S Humphrey, HK Allen International journal of systematic and evolutionary microbiology 68 (5 …, 2018 | 24 | 2018 |
| Intraepithelial T cells diverge by intestinal location as pigs age JE Wiarda, JM Trachsel, ZF Bond, KA Byrne, NK Gabler, CL Loving Frontiers in immunology 11, 540164, 2020 | 22 | 2020 |
| Paenibacillus 79R4, a potential rumen probiotic to enhance nitrite detoxification and methane mitigation in nitrate-treated ruminants EA Latham, WE Pinchak, J Trachsel, HK Allen, TR Callaway, DJ Nisbet, ... Science of the total environment 671, 324-328, 2019 | 21 | 2019 |
| Fermentation products as feed additives mitigate some ill-effects of heat stress in pigs, S Kumar, BE Bass, M Bandrick, CL Loving, SL Brockmeier, T Looft, ... Journal of animal science 95 (1), 279-290, 2017 | 19 | 2017 |
| Isolation, characterization and strain selection of a Paenibacillus species for use as a probiotic to aid in ruminal methane mitigation, nitrate/nitrite detoxification and food … EA Latham, WE Pinchak, J Trachsel, HK Allen, TR Callaway, DJ Nisbet, ... Bioresource technology 263, 358-364, 2018 | 18 | 2018 |
| Shifts in the nasal microbiota of swine in response to different dosing regimens of oxytetracycline administration KT Mou, HK Allen, DP Alt, J Trachsel, SJ Hau, JF Coetzee, DB Holman, ... Veterinary microbiology 237, 108386, 2019 | 17 | 2019 |
| Intestinal single-cell atlas reveals novel lymphocytes in pigs with similarities to human cells JE Wiarda, JM Trachsel, SK Sivasankaran, CK Tuggle, CL Loving Life science alliance 5 (10), 2022 | 16 | 2022 |
| The Role of Salmonella Genomic Island 4 in Metal Tolerance of Salmonella enterica Serovar I 4,[5],12:i:- Pork Outbreak Isolate USDA15WA-1 BL Bearson, JM Trachsel, DC Shippy, SK Sivasankaran, BJ Kerr, ... Genes 11 (11), 1291, 2020 | 16 | 2020 |
| Natural horizontal gene transfer of antimicrobial resistance genes in Campylobacter spp. from turkeys and swine V Guernier-Cambert, J Trachsel, J Maki, J Qi, MJ Sylte, Z Hanafy, ... Frontiers in Microbiology 12, 732969, 2021 | 14 | 2021 |
| Meta-analysis to define a core microbiota in the swine gut. mSystems. 2017 DB Holman, BW Brunelle, J Trachsel, HK Allen Google Scholar, 2017 | 12 | 2017 |
| Complete Genome Sequence of Multidrug-Resistant Salmonella enterica Serovar I 4,[5], 12: i:− 2015 US Pork Outbreak Isolate USDA15WA-1 BL Bearson, JM Trachsel, DB Holman, BW Brunelle, SK Sivasankaran, ... Microbiology resource announcements 8 (40), 10.1128/mra. 00791-19, 2019 | 11 | 2019 |
| Short chain fatty acids and bacterial taxa associated with reduced Salmonella enterica serovar I 4,[5], 12: i:-shedding in swine fed a diet supplemented with resistant potato … JM Trachsel, BL Bearson, BJ Kerr, DC Shippy, KA Byrne, CL Loving, ... Microbiology Spectrum 10 (3), e02202-21, 2022 | 10 | 2022 |
| Re-emergence of salmonellosis in hog farms: outbreak and bacteriological characterization M Meneguzzi, C Pissetti, R Rebelatto, J Trachsel, SS Kuchiishi, AT Reis, ... Microorganisms 9 (5), 947, 2021 | 10 | 2021 |
