Ruth Baker

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Philip MainiProfessor of Mathematical BiologyVerified email at maths.ox.ac.uk
Matthew J SimpsonQueensland University of TechnologyVerified email at qut.edu.au
Eamonn A GaffneyMathematical Institute, University of OxfordVerified email at maths.ox.ac.uk
Kit YatesSenior Lecturer in Applied Mathematics (Mathematical Biology), University of BathVerified email at bath.ac.uk
Thomas WoolleySenior Lecturer in Applied Mathematics, Cardiff UniversityVerified email at cardiff.ac.uk
Alexander G FletcherUniversity of SheffieldVerified email at sheffield.ac.uk
David WarneSenior Lecturer in Statistical Data Science, Queensland University of TechnologyVerified email at qut.edu.au
Santiago SchnellCollege of Science, University of Notre DameVerified email at nd.edu
Linus SchumacherCentre for Regenerative Medicine, Institute for Regeneration and Repair, University of EdinburghVerified email at ed.ac.uk
Randall WidelitzUniversity of Southern CaliforniaVerified email at usc.edu
McElwainQueensland University of TechnologyVerified email at qut.edu.au
David GavaghanProfessor of Computational Biology, University of OxfordVerified email at cs.ox.ac.uk
Sungrim Seirin-LeeKyoto UniversityVerified email at kyoto-u.ac.jp
David KayAssociate Prof in Computational Biology, Department of Computer Science, OxfordVerified email at cs.ox.ac.uk
Scott W McCueProfessor of Applied Mathematics, Queensland University of TechnologyVerified email at qut.edu.au
Katrina TreloarVerified email at qut.edu.au
Louise DysonUniversity of WarwickVerified email at warwick.ac.uk
Philip J MurrayDivision of Mathematics, University of DundeeVerified email at maths.ox.ac.uk
Robert JH RossOkinawa Institute of Science and TechnologyVerified email at oist.jp
Sarah WatersProfessor of Applied Mathematics, University of OxfordVerified email at maths.ox.ac.uk

Ruth Baker

University of Oxford

Verified email at maths.ox.ac.uk - Homepage


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Cyclic dermal BMP signalling regulates stem cell activation during hair regeneration MV Plikus, JA Mayer, D de La Cruz, RE Baker, PK Maini, R Maxson, ... Nature 451 (7176), 340-344, 2008	821	2008
Vertex models of epithelial morphogenesis AG Fletcher, M Osterfield, RE Baker, SY Shvartsman Biophysical journal 106 (11), 2291-2304, 2014	640	2014
Mechanistic models versus machine learning, a fight worth fighting for the biological community? RE Baker, JM Pena, J Jayamohan, A Jérusalem Biology letters 14 (5), 20170660, 2018	379	2018
A random cell motility gradient downstream of FGF controls elongation of an amniote embryo B Bénazéraf, P Francois, RE Baker, N Denans, CD Little, O Pourquié Nature 466 (7303), 248-252, 2010	334	2010
Turing's model for biological pattern formation and the robustness problem PK Maini, TE Woolley, RE Baker, EA Gaffney, SS Lee Interface focus 2 (4), 487-496, 2012	293	2012
The Turing model comes of molecular age PK Maini, RE Baker, CM Chuong Science 314 (5804), 1397-1398, 2006	235	2006
Self-organizing and stochastic behaviors during the regeneration of hair stem cells MV Plikus, RE Baker, CC Chen, C Fare, D De La Cruz, T Andl, PK Maini, ... Science 332 (6029), 586-589, 2011	215	2011
Multiscale mechanisms of cell migration during development: theory and experiment R McLennan, L Dyson, KW Prather, JA Morrison, RE Baker, PK Maini, ... Development 139 (16), 2935-2944, 2012	181	2012
Reptile scale paradigm: Evo-Devo, pattern formation and regeneration C Chang, P Wu, RE Baker, PK Maini, L Alibardi, CM Chuong The International journal of developmental biology 53 (5-6), 813, 2009	179	2009
Correcting mean-field approximations for birth-death-movement processes RE Baker, MJ Simpson Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 82 (4 …, 2010	174	2010
A clock and wavefront mechanism for somite formation RE Baker, S Schnell, PK Maini Developmental biology 293 (1), 116-126, 2006	159	2006
Neural crest migration is driven by a few trailblazer cells with a unique molecular signature narrowly confined to the invasive front R McLennan, LJ Schumacher, JA Morrison, JM Teddy, DA Ridenour, ... Development 142 (11), 2014-2025, 2015	154	2015
Interactions between Shh, Sostdc1 and Wnt signaling and a new feedback loop for spatial patterning of the teeth SW Cho, S Kwak, TE Woolley, MJ Lee, EJ Kim, RE Baker, HJ Kim, ... Development 138 (9), 1807-1816, 2011	152	2011
Multi-cellular rosettes in the mouse visceral endoderm facilitate the ordered migration of anterior visceral endoderm cells G Trichas, AM Smith, N White, V Wilkins, T Watanabe, A Moore, B Joyce, ... PLoS biology 10 (2), e1001256, 2012	129	2012
Quantifying the roles of cell motility and cell proliferation in a circular barrier assay MJ Simpson, KK Treloar, BJ Binder, P Haridas, KJ Manton, DI Leavesley, ... Journal of the Royal Society Interface 10 (82), 20130007, 2013	127	2013
Self-organization process in newborn skin organoid formation inspires strategy to restore hair regeneration of adult cells M Lei, LJ Schumacher, YC Lai, WT Juan, CY Yeh, P Wu, TX Jiang, ... Proceedings of the National Academy of Sciences 114 (34), E7101-E7110, 2017	122	2017
Mechanocellular models of epithelial morphogenesis AG Fletcher, F Cooper, RE Baker Philosophical Transactions of the Royal Society B: Biological Sciences 372 …, 2017	114	2017
Biologically-informed neural networks guide mechanistic modeling from sparse experimental data JH Lagergren, JT Nardini, RE Baker, MJ Simpson, KB Flores PLoS computational biology 16 (12), e1008462, 2020	112	2020
From microscopic to macroscopic descriptions of cell migration on growing domains RE Baker, CA Yates, R Erban Bulletin of mathematical biology 72, 719-762, 2010	111	2010
Partial differential equations for self-organization in cellular and developmental biology RE Baker, EA Gaffney, PK Maini Nonlinearity 21 (11), R251, 2008	104	2008

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