|Integrative analysis of 111 reference human epigenomes|
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
|Genetic and epigenetic fine mapping of causal autoimmune disease variants|
KKH Farh, A Marson, J Zhu, M Kleinewietfeld, WJ Housley, S Beik, ...
Nature 518 (7539), 337-343, 2015
|Genome-wide chromatin state transitions associated with developmental and environmental cues|
J Zhu, M Adli, JY Zou, G Verstappen, M Coyne, X Zhang, T Durham, ...
Cell 152 (3), 642-654, 2013
|KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies|
D Wang, Y Zhang, Z Zhang, J Zhu, J Yu
Genomics, proteomics & bioinformatics 8 (1), 77-80, 2010
|On the nature of human housekeeping genes|
J Zhu, F He, S Hu, J Yu
Trends in genetics 24 (10), 481-484, 2008
|An epigenetic mechanism of resistance to targeted therapy in T cell acute lymphoblastic leukemia|
B Knoechel, JE Roderick, KE Williamson, J Zhu, JG Lohr, MJ Cotton, ...
Nature genetics 46 (4), 364-370, 2014
|Genome-wide chromatin maps derived from limited numbers of hematopoietic progenitors|
M Adli, J Zhu, BE Bernstein
Nature methods 7 (8), 615-618, 2010
|How many human genes can be defined as housekeeping with current expression data?|
J Zhu, F He, S Song, J Wang, J Yu
BMC genomics 9 (1), 172, 2008
|Long-term persistence and development of induced pancreatic beta cells generated by lineage conversion of acinar cells|
W Li, C Cavelti-Weder, Y Zhang, K Clement, S Donovan, G Gonzalez, ...
Nature biotechnology 32 (12), 1223, 2014
|Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research|
S Chang, J Zhang, X Liao, X Zhu, D Wang, J Zhu, T Feng, B Zhu, GF Gao, ...
Nucleic acids research 35 (suppl_1), D376-D380, 2007
|Evaluation of five methods for genome-wide circadian gene identification|
G Wu, J Zhu, J Yu, L Zhou, JZ Huang, Z Zhang
Journal of Biological Rhythms 29 (4), 231-242, 2014
|Translational selection in human: more pronounced in housekeeping genes|
L Ma, P Cui, J Zhu, Z Zhang, Z Zhang
Biology direct 9 (1), 17, 2014
|A novel role for minimal introns: routing mRNAs to the cytosol|
J Zhu, F He, D Wang, K Liu, D Huang, J Xiao, J Wu, S Hu, J Yu
PLoS One 5 (4), 2010
|Modeling transcriptome based on transcript-sampling data|
J Zhu, F He, J Wang, J Yu
PLoS One 3 (2), 2008
|Short-term low-dose mTORC1 inhibition in aged rats counter-regulates age-related gene changes and blocks age-related kidney pathology|
T Shavlakadze, J Zhu, S Wang, W Zhou, B Morin, MA Egerman, L Fan, ...
The Journals of Gerontology: Series A 73 (7), 845-852, 2018
|How do variable substitution rates influence Ka and Ks calculations?|
D Wang, S Zhang, F He, J Zhu, S Hu, J Yu
Genomics, proteomics & bioinformatics 7 (3), 116-127, 2009
|Duplicated enhancer region increases expression of CTSB and segregates with keratolytic winter erythema in South African and Norwegian families|
T Ngcungcu, M Oti, JC Sitek, BI Haukanes, B Linghu, R Bruccoleri, ...
The American Journal of Human Genetics 100 (5), 737-750, 2017
|Gene and genome parameters of mammalian liver circadian genes (LCGs)|
G Wu, J Zhu, F He, W Wang, S Hu, J Yu
PloS one 7 (10), 2012
|Specific correlation between the major chromosome 10q26 haplotype conferring risk for age-related macular degeneration and the expression of HTRA1|
SM Liao, W Zheng, J Zhu, CA Lewis, O Delgado, MA Crowley, ...
Molecular vision 23, 318, 2017
|Age-related gene expression signature in rats demonstrate early, late, and linear transcriptional changes from multiple tissues|
T Shavlakadze, M Morris, J Fang, SX Wang, J Zhu, W Zhou, WT Herman, ...
Cell reports 28 (12), 3263-3273. e3, 2019