| A community-driven global reconstruction of human metabolism I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ... Nature biotechnology 31 (5), 419-425, 2013 | 1142 | 2013 |
| The systems biology graphical notation N Le Novère, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ... Nature biotechnology 27 (8), 735-741, 2009 | 1027 | 2009 |
| BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems N Le Novère, B Bornstein, A Broicher, M Courtot, M Donizelli, H Dharuri, ... Nucleic acids research 34 (suppl 1), D689-D691, 2006 | 966 | 2006 |
| The BioPAX community standard for pathway data sharing E Demir, MP Cary, S Paley, K Fukuda, C Lemer, I Vastrik, G Wu, ... Nature biotechnology 28 (9), 935-942, 2010 | 764 | 2010 |
| Minimum information requested in the annotation of biochemical models (MIRIAM) N Le Novère, A Finney, M Hucka, US Bhalla, F Campagne, ... Nature biotechnology 23 (12), 1509-1515, 2005 | 682 | 2005 |
| A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology MJ Herrgård, N Swainston, P Dobson, WB Dunn, KY Arga, M Arvas, ... Nature biotechnology 26 (10), 1155-1160, 2008 | 674 | 2008 |
| BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models C Li, M Donizelli, N Rodriguez, H Dharuri, L Endler, V Chelliah, L Li, E He, ... BMC systems biology 4 (1), 1-14, 2010 | 669 | 2010 |
| Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project CF Taylor, D Field, SA Sansone, J Aerts, R Apweiler, M Ashburner, ... Nature biotechnology 26 (8), 889-896, 2008 | 605 | 2008 |
| Controlled vocabularies and semantics in systems biology M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ... Molecular systems biology 7 (1), 543, 2011 | 327 | 2011 |
| BioModels: ten-year anniversary V Chelliah, N Juty, I Ajmera, R Ali, M Dumousseau, M Glont, M Hucka, ... Nucleic acids research 43 (D1), D542-D548, 2015 | 319 | 2015 |
| The EBI RDF platform: linked open data for the life sciences S Jupp, J Malone, J Bolleman, M Brandizi, M Davies, L Garcia, A Gaulton, ... Bioinformatics 30 (9), 1338-1339, 2014 | 288 | 2014 |
| Reproducible computational biology experiments with SED-ML-the simulation experiment description markup language D Waltemath, R Adams, FT Bergmann, M Hucka, F Kolpakov, AK Miller, ... BMC systems biology 5 (1), 1-10, 2011 | 288 | 2011 |
| BioModels—15 years of sharing computational models in life science RS Malik-Sheriff, M Glont, TVN Nguyen, K Tiwari, MG Roberts, A Xavier, ... Nucleic acids research 48 (D1), D407-D415, 2020 | 253 | 2020 |
| Identifiers. org and MIRIAM Registry: community resources to provide persistent identification N Juty, N Le Novere, C Laibe Nucleic acids research 40 (D1), D580-D586, 2012 | 233 | 2012 |
| SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools C Chaouiya, D Bérenguier, SM Keating, A Naldi, MP Van Iersel, ... BMC systems biology 7 (1), 1-15, 2013 | 182 | 2013 |
| The impact of mathematical modeling on the understanding of diabetes and related complications I Ajmera, M Swat, C Laibe, N Le Novère, V Chelliah CPT: pharmacometrics & systems pharmacology 2 (7), 1-14, 2013 | 179 | 2013 |
| Minimum information about a simulation experiment (MIASE) D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ... PLoS computational biology 7 (4), e1001122, 2011 | 163 | 2011 |
| COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ... BMC bioinformatics 15 (1), 1-9, 2014 | 142 | 2014 |
| BioModels database: a repository of mathematical models of biological processes V Chelliah, C Laibe, N Le Novère Encyclopedia of Systems Biology, 134-138, 2013 | 137 | 2013 |
| Path2Models: large-scale generation of computational models from biochemical pathway maps F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ... BMC systems biology 7, 1-19, 2013 | 136 | 2013 |
Michael HuckaCalifornia Institute of TechnologyVerified email at caltech.edu
