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Francesco Marass
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Non-invasive analysis of acquired resistance to cancer therapy by sequencing of plasma DNA
M Murtaza, SJ Dawson, DWY Tsui, D Gale, T Forshew, AM Piskorz, ...
Nature, 2013
19482013
Enhanced detection of circulating tumor DNA by fragment size analysis
F Mouliere, D Chandrananda, AM Piskorz, EK Moore, J Morris, ...
Science translational medicine 10 (466), eaat4921, 2018
8822018
Somatic mutations in ATP1A1 and CACNA1D underlie a common subtype of adrenal hypertension
EAB Azizan, H Poulsen, P Tuluc, J Zhou, MV Clausen, A Lieb, C Maniero, ...
Nature genetics 45 (9), 1055-1060, 2013
5442013
Multifocal clonal evolution characterized using circulating tumour DNA in a case of metastatic breast cancer
M Murtaza, SJ Dawson, K Pogrebniak, OM Rueda, E Provenzano, J Grant, ...
Nature communications 6, 8760, 2015
5272015
Tracking the origins and drivers of subclonal metastatic expansion in prostate cancer
MKH Hong, G Macintyre, DC Wedge, P Van Loo, K Patel, S Lunke, ...
Nature communications 6 (1), 6605, 2015
4032015
Optimized p53 immunohistochemistry is an accurate predictor of TP53 mutation in ovarian carcinoma
M Köbel, AM Piskorz, S Lee, S Lui, C LePage, F Marass, N Rosenfeld, ...
The Journal of Pathology: Clinical Research 2 (4), 247-258, 2016
3812016
Clinical and pathological impact of VHL, PBRM1, BAP1, SETD2, KDM6A, and JARID1c in clear cell renal cell carcinoma
L Gossage, M Murtaza, AF Slatter, CP Lichtenstein, A Warren, B Haynes, ...
Genes, chromosomes and cancer 53 (1), 38-51, 2014
1592014
ctDNA monitoring using patient-specific sequencing and integration of variant reads
JCM Wan, K Heider, D Gale, S Murphy, E Fisher, F Mouliere, ...
Science translational medicine 12 (548), eaaz8084, 2020
1582020
Detection of cell‐free DNA fragmentation and copy number alterations in cerebrospinal fluid from glioma patients
F Mouliere, R Mair, D Chandrananda, F Marass, CG Smith, J Su, J Morris, ...
EMBO molecular medicine 10 (12), e9323, 2018
1552018
Association of plasma and urinary mutant DNA with clinical outcomes in muscle invasive bladder cancer
KM Patel, KE Van Der Vos, CG Smith, F Mouliere, D Tsui, J Morris, ...
Scientific Reports 7 (1), 5554, 2017
1052017
Effects of collection and processing procedures on plasma circulating cell-free DNA from cancer patients
B Risberg, DWY Tsui, H Biggs, ARVM de Almagro, SJ Dawson, ...
The Journal of Molecular Diagnostics 20 (6), 883-892, 2018
962018
Measurement of plasma cell-free mitochondrial tumor DNA improves detection of glioblastoma in patient-derived orthotopic xenograft models.
R Mair, F Mouliere, CG Smith, D Chandrananda, D Gale, F Marass, ...
Cancer Research, canres. 0074.2018, 2018
872018
Dynamics of multiple resistance mechanisms in plasma DNA during EGFR‐targeted therapies in non‐small cell lung cancer
DWY Tsui, M Murtaza, ASC Wong, OM Rueda, CG Smith, ...
EMBO molecular medicine 10 (6), e7945, 2018
672018
A phylogenetic latent feature model for clonal deconvolution
F Marass, F Mouliere, K Yuan, N Rosenfeld, F Markowetz
The Annals of Applied Statistics 10 (4), 2377-2404, 2016
562016
A 44K microarray dataset of the changing transcriptome in developing Atlantic salmon (Salmo salar L.)
SG Jantzen, DS Sanderson, KR von Schalburg, M Yasuike, F Marass, ...
BMC research notes 4, 1-7, 2011
542011
Fragment size analysis may distinguish clonal hematopoiesis from tumor-derived mutations in cell-free DNA
F Marass, D Stephens, R Ptashkin, A Zehir, MF Berger, DB Solit, ...
Clinical chemistry 66 (4), 616-618, 2020
432020
Clinical validation of a next-generation sequencing-based multi-cancer early detection “liquid biopsy” blood test in over 1,000 dogs using an independent testing set: The …
A Flory, KM Kruglyak, JA Tynan, LM McLennan, JM Rafalko, PC Fiaux, ...
PLoS One 17 (4), e0266623, 2022
422022
Cell‐free DNA profiling in retinoblastoma patients with advanced intraocular disease: An MSKCC experience
P Kothari, F Marass, JL Yang, CM Stewart, D Stephens, J Patel, M Hasan, ...
Cancer medicine 9 (17), 6093-6101, 2020
412020
Sequence Searcher: A Java tool to perform regular expression and fuzzy searches of multiple DNA and protein sequences
F Marass, C Upton
BMC research notes 2, 1-3, 2009
162009
BnpC: Bayesian non-parametric clustering of single-cell mutation profiles
N Borgsmüller, J Bonet, F Marass, A Gonzalez-Perez, N Lopez-Bigas, ...
Bioinformatics 36 (19), 4854-4859, 2020
142020
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