| Nanopore sequencing and assembly of a human genome with ultra-long reads M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ... Nature biotechnology 36 (4), 338-345, 2018 | 999 | 2018 |
| MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island PM Ashton, S Nair, T Dallman, S Rubino, W Rabsch, S Mwaigwisya, ... Nature biotechnology 33 (3), 296-300, 2015 | 368 | 2015 |
| MinION Analysis and Reference Consortium: Phase 1 data release and analysis CLC Ip, M Loose, JR Tyson, M de Cesare, BL Brown, M Jain, RM Leggett, ... F1000Research 4, 2015 | 230 | 2015 |
| Tuberculosis diagnostics and biomarkers: needs, challenges, recent advances, and opportunities R McNerney, M Maeurer, I Abubakar, B Marais, TD Mchugh, N Ford, ... Journal of Infectious Diseases 205 (suppl_2), S147-S158, 2012 | 214 | 2012 |
| Evaluating the effects of SARS-CoV-2 Spike mutation D614G on transmissibility and pathogenicity E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ... Cell 184 (1), 64-75. e11, 2021 | 206 | 2021 |
| Rapid and accurate detection of Mycobacterium tuberculosis in sputum samples by Cepheid Xpert MTB/RIF assay—a clinical validation study A Rachow, A Zumla, N Heinrich, G Rojas-Ponce, B Mtafya, K Reither, ... PloS one 6 (6), e20458, 2011 | 200 | 2011 |
| Identification of bacterial pathogens and antimicrobial resistance directly from clinical urines by nanopore-based metagenomic sequencing K Schmidt, S Mwaigwisya, LC Crossman, M Doumith, D Munroe, C Pires, ... Journal of Antimicrobial Chemotherapy 72 (1), 104-114, 2016 | 198 | 2016 |
| Drug-resistant tuberculosis—current dilemmas, unanswered questions, challenges, and priority needs A Zumla, I Abubakar, M Raviglione, M Hoelscher, L Ditiu, TD Mchugh, ... Journal of Infectious Diseases 205 (suppl_2), S228-S240, 2012 | 186 | 2012 |
| Transmission of SARS-CoV-2 Lineage B. 1.1. 7 in England: Insights from linking epidemiological and genetic data E Volz, S Mishra, M Chand, JC Barrett, R Johnson, L Geidelberg, ... medRxiv, 2020.12. 30.20249034, 2021 | 182 | 2021 |
| Assessment of the Xpert MTB/RIF assay for diagnosis of tuberculosis with gastric lavage aspirates in children in sub-Saharan Africa: a prospective descriptive study M Bates, J O'Grady, M Maeurer, J Tembo, L Chilukutu, C Chabala, ... The Lancet Infectious Diseases 13 (1), 36-42, 2013 | 170 | 2013 |
| Rapid real-time PCR detection of Listeria monocytogenes in enriched food samples based on the ssrA gene, a novel diagnostic target J O’Grady, S Sedano-Balbás, M Maher, T Smith, T Barry Food microbiology 25 (1), 75-84, 2008 | 158 | 2008 |
| Co-infections: potentially lethal and unexplored in COVID-19 MJ Cox, N Loman, D Bogaert, J O'Grady The Lancet Microbe 1 (1), e11, 2020 | 156 | 2020 |
| Integrated microfluidic tmRNA purification and real-time NASBA device for molecular diagnostics IK Dimov, JL Garcia-Cordero, J O'grady, CR Poulsen, C Viguier, L Kent, ... Lab on a Chip 8 (12), 2071-2078, 2008 | 151 | 2008 |
| Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection T Charalampous, GL Kay, H Richardson, A Aydin, R Baldan, C Jeanes, ... Nature Biotechnology 37 (7), 783-792, 2019 | 110 | 2019 |
| Rapid detection of Listeria monocytogenes in food using culture enrichment combined with real-time PCR J O'Grady, M Ruttledge, S Sedano-Balbás, TJ Smith, T Barry, M Maher Food Microbiology 26 (1), 4-7, 2009 | 109 | 2009 |
| New and improved diagnostics for detection of drug-resistant pulmonary tuberculosis J O'grady, M Maeurer, P Mwaba, N Kapata, M Bates, M Hoelscher, ... Current opinion in pulmonary medicine 17 (3), 134-141, 2011 | 105 | 2011 |
| SARS-CoV-2 evolution during treatment of chronic infection SA Kemp, DA Collier, RP Datir, IATM Ferreira, S Gayed, A Jahun, ... Nature 592 (7853), 277-282, 2021 | 88 | 2021 |
| Tuberculosis in prisons in sub-Saharan Africa–the need for improved health services, surveillance and control J O’Grady, M Hoelscher, R Atun, M Bates, P Mwaba, N Kapata, G Ferrara, ... Tuberculosis 91 (2), 173-178, 2011 | 88 | 2011 |
| Review of multidrug‐resistant and extensively drug‐resistant TB: global perspectives with a focus on sub‐Saharan Africa GB Migliori, K Dheda, R Centis, P Mwaba, M Bates, J O’Grady, ... Tropical Medicine & International Health 15 (9), 1052-1066, 2010 | 87 | 2010 |
| MinION Analysis and Reference Consortium: Phase 2 data release and analysis of R9. 0 chemistry M Jain, JR Tyson, M Loose, CLC Ip, DA Eccles, J O'Grady, S Malla, ... F1000Research 6, 2017 | 83 | 2017 |
Terry SmithProfessor of Biomedical Engineering Science, NUI GalwayVerified email at nuigalway.ie
