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Mikael Huss
Mikael Huss
Forskare i bioinformatik, Stockholms universitet
Verified email at scilifelab.se
Title
Cited by
Cited by
Year
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
X Chen, H Xu, P Yuan, F Fang, M Huss, VB Vega, E Wong, YL Orlov, ...
Cell 133 (6), 1106-1117, 2008
27552008
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics
L Fagerberg, BM Hallström, P Oksvold, C Kampf, D Djureinovic, ...
Molecular & cellular proteomics 13 (2), 397-406, 2014
24822014
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
PL Ståhl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ...
Science 353 (6294), 78-82, 2016
12802016
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst
G Guo, M Huss, GQ Tong, C Wang, LL Sun, ND Clarke, P Robson
Developmental cell 18 (4), 675-685, 2010
8512010
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity
L Song, Z Zhang, LL Grasfeder, AP Boyle, PG Giresi, BK Lee, ...
Genome research 21 (10), 1757-1767, 2011
5662011
The nuclear receptor Nr5a2 can replace Oct4 in the reprogramming of murine somatic cells to pluripotent cells
JCD Heng, B Feng, J Han, J Jiang, P Kraus, JH Ng, YL Orlov, M Huss, ...
Cell stem cell 6 (2), 167-174, 2010
5412010
Subnetwork hierarchies of biochemical pathways
P Holme, M Huss, H Jeong
Bioinformatics 19 (4), 532-538, 2003
5112003
A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity
NY Chia, YS Chan, B Feng, X Lu, YL Orlov, D Moreau, P Kumar, L Yang, ...
Nature 468 (7321), 316-320, 2010
5072010
A primer on deep learning in genomics
J Zou, M Huss, A Abid, P Mohammadi, A Torkamani, A Telenti
Nature genetics 51 (1), 12-18, 2019
4592019
Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells
P Yuan, J Han, G Guo, YL Orlov, M Huss, YH Loh, LP Yaw, P Robson, ...
Genes & development 23 (21), 2507-2520, 2009
2572009
HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics
RMM Branca, LM Orre, HJ Johansson, V Granholm, M Huss, ...
Nature methods 11 (1), 59-62, 2014
2402014
The human gut microbiome as a transporter of antibiotic resistance genes between continents
J Bengtsson-Palme, M Angelin, M Huss, S Kjellqvist, E Kristiansson, ...
Antimicrobial agents and chemotherapy 59 (10), 6551-6560, 2015
2012015
Integrative model of genomic factors for determining binding site selection by estrogen receptor‐α
R Joseph, YL Orlov, M Huss, W Sun, S Li Kong, L Ukil, Y Fu Pan, G Li, ...
Molecular systems biology 6 (1), 456, 2010
1892010
Currency and commodity metabolites: their identification and relation to the modularity of metabolic networks
M Huss, P Holme
IET systems biology 1 (5), 280-285, 2007
1332007
Simple cellular and network control principles govern complex patterns of motor behavior
A Kozlov, M Huss, A Lansner, JH Kotaleski, S Grillner
Proceedings of the National Academy of Sciences 106 (47), 20027-20032, 2009
1172009
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
CA Brownstein, AH Beggs, N Homer, B Merriman, TW Yu, KC Flannery, ...
Genome biology 15 (3), 1-18, 2014
1072014
Breast cancer quantitative proteome and proteogenomic landscape
HJ Johansson, F Socciarelli, NM Vacanti, MH Haugen, Y Zhu, I Siavelis, ...
Nature communications 10 (1), 1-14, 2019
1042019
Discovery of coding regions in the human genome by integrated proteogenomics analysis workflow
Y Zhu, LM Orre, HJ Johansson, M Huss, J Boekel, M Vesterlund, ...
Nature communications 9 (1), 1-14, 2018
962018
Reprogramming of Yersinia from Virulent to Persistent Mode Revealed by Complex In Vivo RNA-seq Analysis
K Avican, A Fahlgren, M Huss, AK Heroven, M Beckstette, P Dersch, ...
PLoS pathogens 11 (1), e1004600, 2015
742015
The human skeletal muscle transcriptome: sex differences, alternative splicing, and tissue homogeneity assessed with RNA sequencing
ME Lindholm, M Huss, BW Solnestam, S Kjellqvist, J Lundeberg, ...
The FASEB Journal 28 (10), 4571-4581, 2014
712014
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Articles 1–20