John W Cassidy
John W Cassidy
University of Cambridge
Verified email at - Homepage
Cited by
Cited by
Landscape of somatic mutations in 560 breast cancer whole-genome sequences
S Nik-Zainal, H Davies, J Staaf, M Ramakrishna, D Glodzik, X Zou, ...
Nature 534 (7605), 47-54, 2016
Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes
JMC Tubio, Y Li, YS Ju, I Martincorena, SL Cooke, M Tojo, G Gundem, ...
Science 345 (6196), 2014
A Biobank of Breast Cancer Explants with Preserved Intra-tumor Heterogeneity to Screen Anticancer Compounds
Cell, 2016
Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer
YS Ju, LB Alexandrov, M Gerstung, I Martincorena, S Nik-Zainal, ...
Elife 3, e02935, 2014
Maintaining tumor heterogeneity in patient-derived tumor xenografts
JW Cassidy, C Caldas, A Bruna
Cancer research 75 (15), 2963-2968, 2015
Prognostic value of KRAS mutations in stage III colon cancer: post hoc analysis of the PETACC8 phase III trial dataset
PETACC-8 study investigators, J Thaler, R Greil, J Gaenzer, W Eisterer, ...
Annals of oncology 26 (4), 822-825, 2015
3 versus 6 months of adjuvant oxaliplatin-fluoropyrimidine combination therapy for colorectal cancer (SCOT): an international, randomised, phase 3, non-inferiority trial
TJ Iveson, RS Kerr, MP Saunders, J Cassidy, NH Hollander, J Tabernero, ...
The Lancet Oncology 19 (4), 562-578, 2018
Frequent somatic transfer of mitochondrial DNA into the nuclear genome of human cancer cells
YS Ju, JMC Tubio, W Mifsud, B Fu, HR Davies, M Ramakrishna, Y Li, ...
Genome research 25 (6), 814-824, 2015
Osteogenic lineage restriction by osteoprogenitors cultured on nanometric grooved surfaces: the role of focal adhesion maturation
JW Cassidy, JN Roberts, CA Smith, M Robertson, K White, MJ Biggs, ...
Acta Biomaterialia 10 (2), 651-660, 2014
Serine 62-phosphorylated MYC associates with nuclear lamins and its regulation by CIP2A is essential for regenerative proliferation
K Myant, X Qiao, T Halonen, C Come, A Laine, M Janghorban, ...
Cell reports 12 (6), 1019-1031, 2015
Nanotechnology in the regeneration of complex tissues
JW Cassidy
Bone and tissue regeneration insights 5, BTRI. S12331, 2014
Direct transcriptional consequences of somatic mutation in breast cancer
A Shlien, K Raine, F Fuligni, R Arnold, S Nik-Zainal, S Dronov, ...
Cell reports 16 (7), 2032-2046, 2016
Patient-derived tumour xenografts for breast cancer drug discovery
JW Cassidy, AS Batra, W Greenwood, A Bruna
Endocrine-related cancer 23 (12), T259-T270, 2016
BMP2/BMPR1A is linked to tumour progression in dedifferentiated liposarcomas
H O'Neil, A Cassidy, O Harris, J Cassidy
PeerJ 4 (e1957), 2016
A Framework for Implementing Machine Learning on Omics Data
G Dubourg-Felonneau, T Cannings, F Cotter, H Thompson, N Patel, ...
arXiv preprint arXiv:1811.10455, 2018
An ICGC major achievement in breast cancer: a comprehensive catalog of mutations and mutational signatures.
F Bertucci, M Chaffanet, D Birnbaum
Chinese clinical oncology 6 (1), 4, 2017
1438P SomaticNET: Neural network evaluation of somatic mutations in cancer
G Dubourg-Felonneau, D Rebergen, C Parsons, H Thompson, ...
Annals of Oncology 30 (Supplement_5), mdz257. 033, 2019
Interlacing personal and reference genomes for machine learning disease-variant detection
LR Harries, S Zhang, G Dubourg-Felonneau, JHR Farmery, J Sinai, ...
arXiv preprint arXiv:1811.11674, 2018
Chapter 4 Tumour Heterogeneity
JW Cassidy, A Bruna
Patient Derived Tumour Xenografts: Promise, Potential and Practice. 1, 37-55, 2017
Profiling lung adenocarcinoma by liquid biopsy: can one size fit all?
HW Clifford, AP Cassidy, C Vaughn, ES Tsai, B Seres, N Patel, HL O’Neill, ...
Cancer nanotechnology 7 (1), 10, 2016
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