Artem Khmelinskii

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B.P.F. LelieveldtProfessor of Biomedical Imaging, LUMC, Delft University of TechnologyVerified email at lumc.nl
Mathias HoehnProfessor of experimental neurology, Research Center JülichVerified email at fz-juelich.de
Marius StaringLeiden University Medical CenterVerified email at lumc.nl
Louise van der WeerdAssociate Professor, Leiden University Medical CenterVerified email at lumc.nl
Oleh DzyubachykLeiden University Medical CenterVerified email at lumc.nl
Johan HC ReiberProf Cardiovascular Imaging, Leiden University Medical CenterVerified email at medisimaging.com
João Miguel SanchesInstitute for Systems and Robotics (ISR/IST), LARSyS, Instituto Superior Técnico, Univ LisboaVerified email at tecnico.ulisboa.pt
Rodrigo VenturaInstitute for Systems and Robotics (ISR/IST), LARSyS, Instituto Superior Técnico, Univ LisboaVerified email at isr.tecnico.ulisboa.pt
Sinisa SkokicLaboratory for Regenerative Neuroscience, University of Zagreb School of MedicineVerified email at hiim.hr
Andreas HessNeuroscience Experimental PharmacologyVerified email at fau.de
Ernst SuidgeestLUMCVerified email at lumc.nl
Peter KokTU Delft, LUMCVerified email at tudelft.nl
Arn van den MaagdenbergProfessor of Molecular and Functional Neurogenetics, Leiden University Medical CenterVerified email at lumc.nl
Emmanuel BarbierInserm / Université Grenoble AlpesVerified email at univ-grenoble-alpes.fr
Lydiane HirschlerSenior researcher, Leiden University Medical CenterVerified email at lumc.nl
Harald GroenNetherlands Cancer Institute (NKI)Verified email at nki.nl
Walid M. AbdelmoulaPrincipal Scientist - AI/ML Computer Vision at JNJ Innovative MedicineVerified email at its.jnj.com
Jouke DijkstraAssociate professor, section leader vascular and molecular imaging, Leiden University Medical CenterVerified email at lumc.nl
Ron M.A. HeerenMaastricht University, FOM-AMOLFVerified email at maastrichtuniversity.nl
Charl BothaPreviously: Assistant Professor of Computer Science, Delft University of TechnologyVerified email at tudelft.nl

Artem Khmelinskii

iii). NKI-AvL ii). LKEB, LUMC i). ISR, IST

Verified email at lumc.nl - Homepage

small animal imaging neuroimaging radiotherapy image processing image segmentation


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Morphological maturation of the mouse brain: an in vivo MRI and histology investigation L Hammelrath, S Škokić, A Khmelinskii, A Hess, N van der Knaap, ... NeuroImage 125, 144–152, 2016	171	2016
Brain maturation of the adolescent rat cortex and striatum: changes in volume and myelination L Mengler, A Khmelinskii, M Diedenhofen, C Po, M Staring, ... NeuroImage 84, 35–44, 2014	158	2014
Articulated whole-body atlases for small animal image analysis: construction and applications A Khmelinskii, M Baiker, EL Kaijzel, J Chen, JHC Reiber, BPF Lelieveldt Molecular Imaging and Biology 13 (5), 898–910, 2011	52	2011
Optical advances in skeletal imaging applied to bone metastases TJA Snoeks, A Khmelinskii, BPF Lelieveldt, EL Kaijzel, C Löwik Bone 48 (1), 106–114, 2011	42	2011
Transit time mapping in the mouse brain using time‐encoded pCASL L Hirschler, LP Munting, A Khmelinskii, WM Teeuwisse, E Suidgeest, ... NMR in Biomedicine 31 (2), e3855, 2018	41	2018
Automated ischemic lesion segmentation in MRI mouse brain data after transient middle cerebral artery occlusion IA Mulder, A Khmelinskii, O Dzyubachyk*, S de Jong, N Rieff, ... Frontiers in Neuroinformatics 11 (3), 2017	28	2017
Precise anatomic localization of accumulated lipids in Mfp2 deficient murine brains through automated registration of SIMS images to the Allen Brain Atlas K Škrášková, A Khmelinskii, WM Abdelmoula, S De Munter, M Baes, ... Journal of The American Society for Mass Spectrometry 26 (6), 948–957, 2015	27	2015
A novel metric for bone marrow cells chromosome pairing A Khmelinskii, R Ventura, J Sanches IEEE Transactions on Biomedical Engineering 57 (6), 1420–1429, 2010	21	2010
Atlas-based organ & bone approximation for ex-vivo μMRI mouse data: a pilot study A Khmelinskii, M Baiker, XJ Chen, JHC Reiber, RM Henkelman, ... Proceedings of the IEEE International Symposium on Biomedical Imaging: From …, 2010	19	2010
Segmentation and visual analysis of whole-body mouse skeleton microSPECT A Khmelinskii, HC Groen, M Baiker, M de Jong, BPF Lelieveldt PLoS ONE 7 (11), e48976, 2012	18	2012
Influence of full-length dystrophin on brain volumes in mouse models of Duchenne muscular dystrophy B Kogelman, A Khmelinskii, I Verhaart, L van Vliet, DI Bink, ... PLoS ONE 13 (3), e0194636, 2018	14	2018
Evaluation of acute esophageal radiation-induced damage using magnetic resonance imaging: a feasibility study in mice P Jelvehgaran, JD Steinberg, A Khmelinskii, G Borst, JY Song, N de Wit, ... Radiation Oncology 14 (1), 1–12, 2019	11	2019
Classifier-assisted metric for chromosome pairing R Ventura, A Khmelinskii, JM Sanches Proceedings of the IEEE Annual International Conference of the IEEE …, 2010	10	2010
Increased mortality and vascular phenotype in a knock-in mouse model of retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations IA Mulder, E Rubio-Beltran, K Ibrahimi, O Dzyubachyk, A Khmelinskii, ... Stroke 51 (1), 300–307, 2020	9	2020
Atlas-based articulated skeleton segmentation of μSPECT mouse data A Khmelinskii, M Baiker, P Kok, J de Swart, JHC Reiber, M de Jong, ... Proceedings of the IEEE International Symposium on Biomedical Imaging: From …, 2011	9	2011
Automatic chromosome pairing using mutual information A Khmelinskii, R Ventura, J Sanches Proceedings of the IEEE Annual International Conference of the IEEE …, 2008	9	2008
Chromosome pairing for karyotyping purposes using mutual information A Khmelinskii, R Ventura, J Sanches Proceedings of the IEEE International Symposium on Biomedical Imaging: From …, 2008	9	2008
Super-resolution reconstruction of whole-body MRI mouse data: an interactive approach A Khmelinskii, E Plenge, P Kok, O Dzyubachyk, DHJ Poot, E Suidgeest, ... Proceedings of the IEEE International Symposium on Biomedical Imaging: From …, 2012	8	2012
Micro cone beam computed tomography for sensitive assessment of radiation-induced late lung toxicity in preclinical models D van Berlo, A Khmelinskii, A Gasparini, FJ Salguero, B Floot, N de Wit, ... Radiotherapy and Oncology 138, 17–24, 2019	5	2019
Interactive local super-resolution reconstruction of whole-body MRI mouse data: a pilot study with applications to bone and kidney metastases O Dzyubachyk, A Khmelinskii, E Plenge, P Kok, TJA Snoeks, ... PLoS ONE 9 (9), e108730, 2014	5	2014

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