Tim Clark, Ph.D.
Tim Clark, Ph.D.
Associate Professor of Public Health Sciences, University of Virginia
Verified email at virginia.edu
TitleCited byYear
The FAIR Guiding Principles for scientific data management and stewardship
MD Wilkinson, M Dumontier, IJJ Aalbersberg, G Appleton, M Axton, ...
Scientific data 3, 2016
16282016
Advancing translational research with the Semantic Web
A Ruttenberg, T Clark, W Bug, M Samwald, O Bodenreider, H Chen, ...
BMC bioinformatics 8 (3), S2, 2007
3262007
Toward interoperable bioscience data
SA Sansone, P Rocca-Serra, D Field, E Maguire, C Taylor, O Hofmann, ...
Nature genetics 44 (2), 121, 2012
2992012
Histones associated with downregulated genes are hypo-acetylated in Huntington's disease models
G Sadri-Vakili, B Bouzou, CL Benn, MO Kim, P Chawla, RP Overland, ...
Human molecular genetics 16 (11), 1293-1306, 2007
1912007
Globally distributed object identification for biological knowledgebases
T Clark, S Martin, T Liefeld
Briefings in bioinformatics 5 (1), 59-70, 2004
1842004
Huntingtin modulates transcription, occupies gene promoters in vivo, and binds directly to DNA in a polyglutamine-dependent manner
CL Benn, T Sun, G Sadri-Vakili, KN McFarland, DP DiRocco, GJ Yohrling, ...
Journal of Neuroscience 28 (42), 10720-10733, 2008
1772008
Effects of gender on nigral gene expression and parkinson disease
I Cantuti-Castelvetri, C Keller-McGandy, B Bouzou, G Asteris, TW Clark, ...
Neurobiology of disease 26 (3), 606-614, 2007
1762007
An open annotation ontology for science on web 3.0
P Ciccarese, M Ocana, LJG Castro, S Das, T Clark
Journal of biomedical semantics 2 (2), S4, 2011
1632011
The SWAN biomedical discourse ontology
P Ciccarese, E Wu, G Wong, M Ocana, J Kinoshita, A Ruttenberg, T Clark
Journal of biomedical informatics 41 (5), 739-751, 2008
1502008
Produce and Consume Linked Data with Drupal!
S Corlosquet, R Delbru, T Clark, A Polleres, S Decker
International Semantic Web Conference, 763-778, 2009
1092009
The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside
JS Luciano, B Andersson, C Batchelor, O Bodenreider, T Clark, ...
Journal of biomedical semantics 2 (2), S1, 2011
882011
Achieving human and machine accessibility of cited data in scholarly publications
J Starr, E Castro, M Crosas, M Dumontier, RR Downs, R Duerr, LL Haak, ...
PeerJ Computer Science 1, e1, 2015
732015
SWAN: A distributed knowledge infrastructure for Alzheimer disease research
Y Gao, J Kinoshita, E Wu, E Miller, R Lee, A Seaborne, S Cayzer, T Clark
Web Semantics: Science, Services and Agents on the World Wide Web 4 (3), 222-228, 2006
712006
Open annotation data model
R Sanderson, P Ciccarese, H Van de Sompel, S Bradshaw, D Brickley, ...
W3C community draft, 2013
692013
PAV ontology: provenance, authoring and versioning
P Ciccarese, S Soiland-Reyes, K Belhajjame, AJG Gray, C Goble, T Clark
Journal of biomedical semantics 4 (1), 37, 2013
682013
Alzforum and SWAN: the present and future of scientific web communities
T Clark, J Kinoshita
Briefings in bioinformatics 8 (3), 163-171, 2007
652007
Micropublications: a semantic model for claims, evidence, arguments and annotations in biomedical communications
T Clark, PN Ciccarese, CA Goble
Journal of biomedical semantics 5 (1), 28, 2014
642014
Genome-Wide Histone Acetylation Is Altered in a Transgenic Mouse Model of Huntington's Disease
KN McFarland, S Das, TT Sun, D Leyfer, E Xia, GR Sangrey, A Kuhn, ...
PLoS One 7 (7), e41423, 2012
642012
Open semantic annotation of scientific publications using DOMEO
P Ciccarese, M Ocana, T Clark
Journal of biomedical semantics 3 (1), S1, 2012
592012
AlzPharm: integration of neurodegeneration data using RDF
HYK Lam, L Marenco, T Clark, Y Gao, J Kinoshita, G Shepherd, P Miller, ...
BMC bioinformatics 8 (3), S4, 2007
572007
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Articles 1–20