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Arun Prasad Pandurangan
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The InterPro protein families and domains database: 20 years on
M Blum, HY Chang, S Chuguransky, T Grego, S Kandasaamy, A Mitchell, ...
Nucleic acids research 49 (D1), D344-D354, 2021
16442021
InterPro in 2019: improving coverage, classification and access to protein sequence annotations
AL Mitchell, TK Attwood, PC Babbitt, M Blum, P Bork, A Bridge, SD Brown, ...
Nucleic acids research 47 (D1), D351-D360, 2019
14712019
InterPro in 2022
T Paysan-Lafosse, M Blum, S Chuguransky, T Grego, BL Pinto, ...
Nucleic acids research 51 (D1), D418-D427, 2023
8432023
SDM: a server for predicting effects of mutations on protein stability
AP Pandurangan, B Ochoa-Montano, DB Ascher, TL Blundell
Nucleic acids research 45 (W1), W229-W235, 2017
4472017
Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin
C Leung, NV Dudkina, N Lukoyanova, AW Hodel, I Farabella, ...
elife 3, e04247, 2014
1662014
Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health
HC Jubb, AP Pandurangan, MA Turner, B Ochoa-Montaño, TL Blundell, ...
Progress in biophysics and molecular biology 128, 3-13, 2017
1592017
The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver
AP Pandurangan, J Stahlhacke, ME Oates, B Smithers, J Gough
Nucleic acids research 47 (D1), D490-D494, 2019
1532019
Two distinct trimeric conformations of natively membrane-anchored full-length herpes simplex virus 1 glycoprotein B
T Zeev-Ben-Mordehai, D Vasishtan, A Hernández Durán, B Vollmer, ...
Proceedings of the National Academy of Sciences 113 (15), 4176-4181, 2016
1032016
TEMPy: a Python library for assessment of three-dimensional electron microscopy density fits
I Farabella, D Vasishtan, AP Joseph, AP Pandurangan, H Sahota, M Topf
Journal of applied crystallography 48 (4), 1314-1323, 2015
812015
Prediction of impacts of mutations on protein structure and interactions: SDM, a statistical approach, and mCSM, using machine learning
AP Pandurangan, TL Blundell
Protein Science, 2020
652020
The structure of herpesvirus fusion glycoprotein B-bilayer complex reveals the protein-membrane and lateral protein-protein interaction
UE Maurer, T Zeev-Ben-Mordehai, AP Pandurangan, TM Cairns, ...
Structure 21 (8), 1396-1405, 2013
582013
Structural analysis of coxsackievirus A7 reveals conformational changes associated with uncoating
JJT Seitsonen, S Shakeel, P Susi, AP Pandurangan, RS Sinkovits, ...
Journal of virology 86 (13), 7207-7215, 2012
582012
Genomes, structural biology and drug discovery: combating the impacts of mutations in genetic disease and antibiotic resistance
AP Pandurangan, DB Ascher, SE Thomas, TL Blundell
Biochemical Society transactions 45 (2), 303-311, 2017
402017
Finding rigid bodies in protein structures: application to flexible fitting into cryoEM maps
AP Pandurangan, M Topf
Journal of structural biology 177 (2), 520-531, 2012
392012
Conformational States of macromolecular assemblies explored by integrative structure calculation
K Thalassinos, AP Pandurangan, M Xu, F Alber, M Topf
Structure 21 (9), 1500-1508, 2013
382013
γ-TEMPy: simultaneous fitting of components in 3D-EM maps of their assembly using a genetic algorithm
AP Pandurangan, D Vasishtan, F Alber, M Topf
Structure 23 (12), 2365-2376, 2015
352015
A new peptide docking strategy using a mean field technique with mutually orthogonal Latin square sampling
P Arun Prasad, N Gautham
Journal of computer-aided molecular design 22, 815-829, 2008
352008
Genetic risk factors for death with SARS-CoV-2 from the UK Biobank
C Lu, R Gam, AP Pandurangan, J Gough
MedRxiv, 2020.07. 01.20144592, 2020
302020
Combined approaches to flexible fitting and assessment in virus capsids undergoing conformational change
AP Pandurangan, S Shakeel, SJ Butcher, M Topf
Journal of Structural Biology 185 (3), 427-439, 2014
272014
Photo-antagonism of the GABAA receptor
M Mortensen, F Iqbal, AP Pandurangan, S Hannan, R Huckvale, M Topf, ...
Nature communications 5 (1), 4454, 2014
242014
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