John Wain
John Wain
Quadram Institute Biosciences
Verified email at - Homepage
Cited by
Cited by
Performance comparison of benchtop high-throughput sequencing platforms
NJ Loman, RV Misra, TJ Dallman, C Constantinidou, SE Gharbia, J Wain, ...
Nature biotechnology 30 (5), 434-439, 2012
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18
J Parkhill, G Dougan, KD James, NR Thomson, D Pickard, J Wain, ...
Nature 413 (6858), 848-852, 2001
Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity
E Volz, V Hill, JT McCrone, A Price, D Jorgensen, O’Toole, J Southgate, ...
Cell 184 (1), 64-75. e11, 2021
A study of typhoid fever in five Asian countries: disease burden and implications for controls
RL Ochiai, CJ Acosta, MC Danovaro-Holliday, D Baiqing, ...
Bulletin of the world health organization 86 (4), 260-268, 2008
Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica
M Achtman, J Wain, FX Weill, S Nair, Z Zhou, V Sangal, MG Krauland, ...
PLoS pathogens 8 (6), e1002776, 2012
Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
GC Langridge, MD Phan, DJ Turner, TT Perkins, L Parts, J Haase, ...
Genome research 19 (12), 2308-2316, 2009
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi
KE Holt, J Parkhill, CJ Mazzoni, P Roumagnac, FX Weill, I Goodhead, ...
Nature genetics 40 (8), 987-993, 2008
MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island
PM Ashton, S Nair, T Dallman, S Rubino, W Rabsch, S Mwaigwisya, ...
Nature biotechnology 33 (3), 296-300, 2015
Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection
T Charalampous, GL Kay, H Richardson, A Aydin, R Baldan, C Jeanes, ...
Nature biotechnology 37 (7), 783-792, 2019
Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa
CK Okoro, RA Kingsley, TR Connor, SR Harris, CM Parry, ...
Nature genetics 44 (11), 1215-1221, 2012
Salmonella typhi, the causative agent of typhoid fever, is approximately 50,000 years old
C Kidgell, U Reichard, J Wain, B Linz, M Torpdahl, G Dougan, M Achtman
Infection, Genetics and Evolution 2 (1), 39-45, 2002
Quinolone-Resistant Salmonella typhi in Viet Nam: Molecular Basis of Resistance and Clinical Response to Treatment
J Wain, NTT Hoa, NT Chinh, H Vinh, MJ Everett, TS Diep, NPJ Day, ...
Clinical infectious diseases 25 (6), 1404-1410, 1997
Quantitation of bacteria in blood of typhoid fever patients and relationship between counts and clinical features, transmissibility, and antibiotic resistance
J Wain, TS Diep, VA Ho, AM Walsh, NTT Hoa, CM Parry, NJ White
Journal of clinical microbiology 36 (6), 1683-1687, 1998
Background document: the diagnosis, treatment and prevention of typhoid fever
World Health Organization
World health organization, 2003
Antimicrobial Drug Resistance of Salmonella enterica Serovar Typhi in Asia and Molecular Mechanism of Reduced Susceptibility to the Fluoroquinolones
TT Chau, JI Campbell, CM Galindo, N Van Minh Hoang, TS Diep, ...
Antimicrobial agents and chemotherapy 51 (12), 4315-4323, 2007
Identification of bacterial pathogens and antimicrobial resistance directly from clinical urines by nanopore-based metagenomic sequencing
K Schmidt, S Mwaigwisya, LC Crossman, M Doumith, D Munroe, C Pires, ...
Journal of Antimicrobial Chemotherapy 72 (1), 104-114, 2016
International Spread of an Epidemic Population of Salmonella enterica Serotype Kentucky ST198 Resistant to Ciprofloxacin
S Le Hello, RS Hendriksen, B Doublet, I Fisher, EM Nielsen, JM Whichard, ...
Journal of Infectious Diseases 204 (5), 675-684, 2011
Typhoid fever: pathogenesis and disease
D House, A Bishop, C Parry, G Dougan, J Wain
Current opinion in infectious diseases 14 (5), 573-578, 2001
Quantitation of bacteria in bone marrow from patients with typhoid fever: relationship between counts and clinical features
J Wain, PVB Bay, HA Vinh, NM Duong, TS Diep, AL Walsh, CM Parry, ...
Journal of clinical microbiology 39 (4), 1571-1576, 2001
Salmonella paratyphi A rates, Asia
RL Ochiai, XY Wang, L Von Seidlein, J Yang, ZA Bhutta, SK Bhattacharya, ...
Emerging infectious diseases 11 (11), 1764, 2005
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