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Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus Paracoccidioides brasiliensis RT Arrial, RC Togawa, MM Brigido BMC bioinformatics 10, 1-9, 2009 | 142 | 2009 |
Characterization of soil bacterial assemblies in Brazilian savanna-like vegetation reveals acidobacteria dominance JF Araujo, AP de Castro, MMC Costa, RC Togawa, GJP Júnior, ... Microbial ecology 64, 760-770, 2012 | 125 | 2012 |
Global transcriptome analysis of two wild relatives of peanut under drought and fungi infection PM Guimarăes, ACM Brasileiro, CV Morgante, ACQ Martins, G Pappas, ... BMC genomics 13, 1-15, 2012 | 110 | 2012 |
Molecular modelling of the emergence of azole resistance in Mycosphaerella graminicola JGL Mullins, JE Parker, HJ Cools, RC Togawa, JA Lucas, BA Fraaije, ... PloS one 6 (6), e20973, 2011 | 106 | 2011 |
Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acuminata Colla: Isolation, RFLP marker development, and physical mapping RNG Miller, DJ Bertioli, FC Baurens, CMR Santos, PC Alves, NF Martins, ... BMC Plant Biology 8, 1-15, 2008 | 105 | 2008 |
STING Millennium: A web-based suite of programs for comprehensive and simultaneous analysis of protein structure and sequence G Neshich, RC Togawa, AL Mancini, PR Kuser, MEB Yamagishi, ... Nucleic acids research 31 (13), 3386-3392, 2003 | 87 | 2003 |
Transcriptome Profiling of Wild Arachis from Water-Limited Environments Uncovers Drought Tolerance Candidate Genes ACM Brasileiro, CV Morgante, ACG Araujo, SCM Leal-Bertioli, AK Silva, ... Plant Molecular Biology Reporter 33, 1876-1892, 2015 | 78 | 2015 |
Root transcriptome analysis of wild peanut reveals candidate genes for nematode resistance PM Guimaraes, LA Guimaraes, CV Morgante, OB Silva Jr, ACG Araujo, ... PloS one 10 (10), e0140937, 2015 | 76 | 2015 |
Transcription profile of soybean-root-knot nematode interaction reveals a key role of phythormones in the resistance reaction MA Beneventi, OB da Silva, MEL de Sá, AAP Firmino, RMS de Amorim, ... BMC genomics 14, 1-17, 2013 | 74 | 2013 |
Transcriptome Analysis in Cotton Boll Weevil (Anthonomus grandis) and RNA Interference in Insect Pests AAP Firmino, FCA Fonseca, LLP de Macedo, RR Coelho, ... PloS one 8 (12), e85079, 2013 | 70 | 2013 |
Analysis of the leaf transcriptome of Musa acuminata during interaction with Mycosphaerella musicola: gene assembly, annotation and marker development MAN Passos, VO de Cruz, FL Emediato, CC de Teixeira, VCR Azevedo, ... BMC genomics 14, 1-17, 2013 | 63 | 2013 |
Analysis of expressed sequence tags from Musa acuminata ssp. burmannicoides, var. Calcutta 4 (AA) leaves submitted to temperature stresses CMR Santos, NF Martins, HM Hörberg, ERP De Almeida, MCF Coelho, ... Theoretical and Applied Genetics 110, 1517-1522, 2005 | 55 | 2005 |
JavaProtein Dossier: a novel web-based data visualization tool for comprehensive analysis of protein structure G Neshich, W Rocchia, AL Mancini, MEB Yamagishi, PR Kuser, R Fileto, ... Nucleic Acids Research 32 (suppl_2), W595-W601, 2004 | 55 | 2004 |
PHPH: Web based tool for simple electropherogram quality analysis RC Togawa, MM Brigido 1st International Conference on Bioinformatics and Computational Biology …, 2003 | 54 | 2003 |
Worker honeybee brain proteome LG Hernández, B Lu, GCN da Cruz, LK Calábria, NF Martins, R Togawa, ... Journal of proteome research 11 (3), 1485-1493, 2012 | 51 | 2012 |
Identification and expression profile of odorant‐binding proteins in Halyomorpha halys (Hemiptera: Pentatomidae) DP Paula, RC Togawa, MMC Costa, P Grynberg, NF Martins, DA Andow Insect Molecular Biology 25 (5), 580-594, 2016 | 47 | 2016 |
Comparative root transcriptome of wild Arachis reveals NBS-LRR genes related to nematode resistance APZ Mota, B Vidigal, EGJ Danchin, RC Togawa, SCM Leal-Bertioli, ... BMC plant biology 18, 1-16, 2018 | 44 | 2018 |
STING Contacts: a web-based application for identification and analysis of amino acid contacts within protein structure and across protein interfaces AL Mancini, RH Higa, A Oliveira, F Dominiquini, PR Kuser, ... Bioinformatics 20 (13), 2145-2147, 2004 | 44 | 2004 |
The diamond STING server G Neshich, LC Borro, RH Higa, PR Kuser, MEB Yamagishi, EH Franco, ... Nucleic acids research 33 (suppl_2), W29-W35, 2005 | 43 | 2005 |