Chiara Damiani
Chiara Damiani
Department of Informatics, Systems and Communication University of Milan Bicocca
Verified email at unimib.it - Homepage
TitleCited byYear
Dynamical properties of a Boolean model of gene regulatory network with memory
A Graudenzi, R Serra, M Villani, C Damiani, A Colacci, SA Kauffman
Journal of Computational Biology 18 (10), 1291-1303, 2011
402011
Computational Strategies for a System-Level Understanding of Metabolism
P Cazzaniga, C Damiani, D Besozzi, R Colombo, MS Nobile, D Gaglio, ...
Metabolites 4 (4), 1034-1087, 2014
302014
Cell-cell interaction and diversity of emergent behaviours
C Damiani, R Serra, M Villani, SA Kauffman, A Colacci
IET systems biology 5 (2), 137-144, 2011
272011
The diffusion of perturbations in a model of coupled random boolean networks
R Serra, M Villani, C Damiani, A Graudenzi, A Colacci
Lecture Notes in Computer Science, 315-322, 2008
262008
Zooming-in on cancer metabolic rewiring with tissue specific constraint-based models
M Di Filippo, R Colombo, C Damiani, D Pescini, D Gaglio, M Vanoni, ...
Computational biology and chemistry 62, 60-69, 2016
162016
Information transfer among coupled random boolean networks
C Damiani, SA Kauffman, R Serra, M Villani, A Colacci
International Conference on Cellular Automata, 1-11, 2010
162010
Interacting random boolean networks
R Serra, M Villani, C Damiani, A Graudenzi, A Colacci, SA Kauffman
Proceedings of ECCS07: European Conference on Complex Systems, 2007
162007
Growth and Division in a Dynamic Protocell Model
M Villani, A Filisetti, A Graudenzi, C Damiani, T Carletti, R Serra
Life 4 (4), 837-864, 2014
152014
CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks
A Paroni, A Graudenzi, G Caravagna, C Damiani, G Mauri, M Antoniotti
BMC bioinformatics 17 (1), 64, 2016
142016
An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes
C Damiani, D Pescini, R Colombo, S Molinari, L Alberghina, M Vanoni, ...
Natural Computing 13 (3), 321-331, 2014
132014
A stochastic model of catalytic reaction networks in protocells
R Serra, A Filisetti, M Villani, A Graudenzi, C Damiani, T Panini
Natural Computing 13 (3), 367-377, 2014
122014
A stochastic model of catalytic reaction networks in protocells
R Serra, A Filisetti, M Villani, A Graudenzi, C Damiani, T Panini
Natural Computing 13 (3), 367-377, 2014
122014
Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks
C Damiani, A Filisetti, A Graudenzi, P Lecca
Computational biology and chemistry 42, 5-17, 2013
112013
On RAF sets and autocatalytic cycles in random reaction networks
A Filisetti, M Villani, C Damiani, A Graudenzi, A Roli, W Hordijk, R Serra
Italian Workshop on Artificial Life and Evolutionary Computation, 113-126, 2014
82014
A metabolic core model elucidates how enhanced utilization of glucose and glutamine, with enhanced glutamine-dependent lactate production, promotes cancer cell growth: Theá…
C Damiani, R Colombo, D Gaglio, F Mastroianni, D Pescini, ...
PLoS computational biology 13 (9), e1005758, 2017
72017
Dynamical regimes in non-ergodic random Boolean networks
M Villani, D Campioli, C Damiani, A Roli, A Filisetti, R Serra
Natural Computing 16 (2), 353-363, 2017
62017
Model identification using correlation-based inference and transfer entropy estimation
C Damiani, P Lecca
2011 UKSim 5th European Symposium on Computer Modeling and Simulation, 129-134, 2011
62011
Divergent in vitro/in vivo responses to drug treatments of highly aggressive NIH-Ras cancer cells: a PET imaging and metabolomics-mass-spectrometry study
D Gaglio, S Valtorta, M Ripamonti, M Bonanomi, C Damiani, S Todde, ...
Oncotarget 7 (32), 52017, 2016
52016
The role of backward reactions in a stochastic model of catalytic reaction networks
A Filisetti, A Graudenzi, C Damiani, M Villani, R Serra
Advances in Artificial Life, ECAL 12, 793-801, 2013
52013
popFBA: tackling intratumour heterogeneity with Flux Balance Analysis
C Damiani, M Di Filippo, D Pescini, D Maspero, R Colombo, G Mauri
Bioinformatics 33 (14), i311-i318, 2017
42017
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Articles 1–20