Remus T. Dame, PhD

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Gijs J.L. WuiteVU University AmsterdamVerified email at vu.nl
M.c. NoomEnexisVerified email at enexis.nl
David C GraingerInstitute of Microbiology and Infection, School of Biosciences, University of Birmingham, UK.Verified email at bham.ac.uk
Rosalie P. C. DriessenPostdoctoral researcherVerified email at chem.leidenuniv.nl
Martijn S. LuijsterburgAssociate professorVerified email at lumc.nl
John van NoortPhysics of Life Processes, Leiden UniversityVerified email at physics.leidenuniv.nl
Mariliis Tark-DameSenior post-doc, University of AmsterdamVerified email at uva.nl
Edze WestraProfessor of Microbiology, University of Exeter, Biosciences, ESIVerified email at exeter.ac.uk
Stan J.J. BrounsProfessor of Molecular Microbiology, Delft University of TechnologyVerified email at tudelft.nl
John van der OostMicrobiology, Wageningen UniversityVerified email at wur.nl
Malcolm F WhiteUniversity of St AndrewsVerified email at st-and.ac.uk
Rajesh Shahapure, PhDResearch Associate, University of CambridgeVerified email at cam.ac.uk
Finn WernerProf Molecular Biophysics, University College London, UKVerified email at ucl.ac.uk
Paul A. WigginsUniversity of WashingtonVerified email at uw.edu
Cees DekkerKavli Institute of Nanoscience, Delft University of Technology, The NetherlandsVerified email at tudelft.nl
William NavarreProfessor of Molecular Genetics, University of TorontoVerified email at utoronto.ca
Felix HolRadboud University Medical CenterVerified email at stanford.edu
Iddo HellerAssistant professor Physics of Living Systems, VU University AmsterdamVerified email at vu.nl
Sonja-Verena AlbersUniversity of Freiburg, Institute of Biology II, MicrobiologyVerified email at biologie.uni-freiburg.de
giampaolo zuccheriUniversity of BolognaVerified email at unibo.it

Remus T. Dame, PhD

Leiden University, Leiden Institute of Chemistry, Centre for Microbial Cell Biology

Verified email at chem.leidenuniv.nl - Homepage

Chromatin organization and dynamics


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CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3 ER Westra, PBG van Erp, T Künne, SP Wong, RHJ Staals, CLC Seegers, ... Molecular cell 46 (5), 595-605, 2012	737	2012
The role of nucleoid‐associated proteins in the organization and compaction of bacterial chromatin RT Dame Molecular microbiology 56 (4), 858-870, 2005	477	2005
Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulation RT Dame, MC Noom, GJL Wuite Nature 444 (7117), 387-390, 2006	443	2006
Dual architectural roles of HU: formation of flexible hinges and rigid filaments J van Noort, S Verbrugge, N Goosen, C Dekker, RT Dame Proceedings of the National Academy of Sciences 101 (18), 6969-6974, 2004	362	2004
H-NS mediated compaction of DNA visualised by atomic force microscopy RT Dame, C Wyman, N Goosen Nucleic acids research 28 (18), 3504-3510, 2000	357	2000
The architectural role of nucleoid-associated proteins in the organization of bacterial chromatin: a molecular perspective MS Luijsterburg, MC Noom, GJL Wuite, RT Dame Journal of structural biology 156 (2), 262-272, 2006	328	2006
The major architects of chromatin: architectural proteins in bacteria, archaea and eukaryotes MS Luijsterburg, MF White, R Van Driel, RT Dame Critical reviews in biochemistry and molecular biology 43 (6), 393-418, 2008	273	2008
Moltemplate: A tool for coarse-grained modeling of complex biological matter and soft condensed matter physics AI Jewett, D Stelter, J Lambert, SM Saladi, OM Roscioni, M Ricci, L Autin, ... Journal of molecular biology 433 (11), 166841, 2021	253	2021
Structural basis for H-NS-mediated trapping of RNA polymerase in the open initiation complex at the rrnB P1 RT Dame, C Wyman, R Wurm, R Wagner, N Goosen Journal of Biological Chemistry 277 (3), 2146-2150, 2002	229	2002
Chromosome organization in bacteria: mechanistic insights into genome structure and function RT Dame, FZM Rashid, DC Grainger Nature Reviews Genetics 21 (4), 227-242, 2020	178	2020
DNA bridging: a property shared among H-NS-like proteins RT Dame, MS Luijsterburg, E Krin, PN Bertin, R Wagner, GJL Wuite Journal of bacteriology 187 (5), 1845-1848, 2005	174	2005
HU: promoting or counteracting DNA compaction? RT Dame, N Goosen FEBS letters 529 (2-3), 151-156, 2002	157	2002
Chromosomal macrodomains and associated proteins: implications for DNA organization and replication in gram negative bacteria RT Dame, OJ Kalmykowa, DC Grainger PLoS genetics 7 (6), e1002123, 2011	134	2011
Structural basis for preferential binding of H-NS to curved DNA RT Dame, C Wyman, N Goosen Biochimie 83 (2), 231-234, 2001	134	2001
The interplay between nucleoid organization and transcription in archaeal genomes E Peeters, RPC Driessen, F Werner, RT Dame Nature Reviews Microbiology 13 (6), 333-341, 2015	120	2015
H-NS promotes looped domain formation in the bacterial chromosome MC Noom, WW Navarre, T Oshima, GJL Wuite, RT Dame Current Biology 17 (21), R913-R914, 2007	120	2007
dCas9: a versatile tool for epigenome editing DJW Brocken, M Tark-Dame, RT Dame Current issues in molecular biology 26 (1), 15-32, 2018	115	2018
Alba shapes the archaeal genome using a delicate balance of bridging and stiffening the DNA N Laurens, RPC Driessen, I Heller, D Vorselen, MC Noom, FJH Hol, ... Nature communications 3 (1), 1328, 2012	110	2012
Effect of temperature on the intrinsic flexibility of DNA and its interaction with architectural proteins RPC Driessen, G Sitters, N Laurens, GF Moolenaar, GJL Wuite, N Goosen, ... Biochemistry 53 (41), 6430-6438, 2014	104	2014
Structure and function of archaeal histones B Henneman, C Van Emmerik, T Brouwer, RA Van der Valk, N Kirolos, ... Biophysical Journal 114 (3), 446a, 2018	102	2018

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