Herbert M Sauro
Herbert M Sauro
Verified email at u.washington.edu - Homepage
TitleCited byYear
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
M Hucka, A Finney, HM Sauro, H Bolouri, JC Doyle, H Kitano, AP Arkin, ...
Bioinformatics 19 (4), 524-531, 2003
30842003
BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems
N Le Novere, B Bornstein, A Broicher, M Courtot, M Donizelli, H Dharuri, ...
Nucleic acids research 34 (suppl_1), D689-D691, 2006
8032006
The systems biology graphical notation
N Le Novere, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ...
Nature biotechnology 27 (8), 735, 2009
7652009
Minimum information requested in the annotation of biochemical models (MIRIAM)
N Le Novère, A Finney, M Hucka, US Bhalla, F Campagne, ...
Nature biotechnology 23 (12), 1509, 2005
5802005
Metabolic control and its analysis: additional relationships between elasticities and control coefficients
DA FELL, HM SAURO
European Journal of Biochemistry 148 (3), 555-561, 1985
3291985
Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration
HM Sauro, M Hucka, A Finney, C Wellock, H Bolouri, J Doyle, H Kitano
Omics A Journal of Integrative Biology 7 (4), 355-372, 2003
3222003
Transcriptional dynamics of the embryonic stem cell switch
V Chickarmane, C Troein, UA Nuber, HM Sauro, C Peterson
PLoS computational biology 2 (9), e123, 2006
2562006
Quantitative analysis of signaling networks
HM Sauro, BN Kholodenko
Progress in biophysics and molecular biology 86 (1), 5-43, 2004
2532004
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology
M Galdzicki, KP Clancy, E Oberortner, M Pocock, JY Quinn, CA Rodriguez, ...
Nature biotechnology 32 (6), 545, 2014
1992014
TinkerCell: modular CAD tool for synthetic biology
D Chandran, FT Bergmann, HM Sauro
Journal of biological engineering 3 (1), 19, 2009
1972009
SCAMP: a general-purpose simulator and metabolic control analysis program
HM Sauro
Bioinformatics 9 (4), 441-450, 1993
1821993
Sensitivity analysis of stoichiometric networks: an extension of metabolic control analysis to non-steady state trajectories
BP Ingalls, HM Sauro
Journal of theoretical biology 222 (1), 23-36, 2003
1692003
Metabolic control and its analysis: extensions to the theory and matrix method
HM SAURO, JR SMALL, DA FELL
European journal of biochemistry 165 (1), 215-221, 1987
1441987
33 JARNAC: a system for interactive metabolic analysis
HM Sauro
1422000
In-Fusion BioBrick assembly and re-engineering
SC Sleight, BA Bartley, JA Lieviant, HM Sauro
Nucleic acids research 38 (8), 2624-2636, 2010
1382010
Designing and engineering evolutionary robust genetic circuits
SC Sleight, BA Bartley, JA Lieviant, HM Sauro
Journal of biological engineering 4 (1), 12, 2010
1212010
Minimum information about a simulation experiment (MIASE)
D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ...
PLoS computational biology 7 (4), e1001122, 2011
1132011
The ERATO Systems Biology Workbench: enabling interaction and exchange between software tools for computational biology
M Hucka, A Finney, HM Sauro, H Bolouri, J Doyle, H Kitano
Biocomputing 2002, 450-461, 2001
1112001
Conservation analysis in biochemical networks: computational issues for software writers
HM Sauro, B Ingalls
Biophysical chemistry 109 (1), 1-15, 2004
982004
Enzyme kinetics for systems biology
HM Sauro
Future Skill Software, 2011
942011
The system can't perform the operation now. Try again later.
Articles 1–20