Valentine Svensson
TitleCited byYear
The technology and biology of single-cell RNA sequencing
AA Kolodziejczyk, JK Kim, V Svensson, JC Marioni, SA Teichmann
Molecular cell 58 (4), 610-620, 2015
4102015
Power Analysis of Single Cell RNA‐Sequencing Experiments
V Svensson, KN Natarajan, LH Ly, RJ Miragaia, C Labalette, IC Macaulay, ...
Nature Methods 14 (4), 381-387, 2017
1942017
Exponential scaling of single-cell RNA-seq in the past decade
V Svensson, R Vento-Tormo, SA Teichmann
Nature protocols 13 (4), 599, 2018
1372018
Single-cell RNA-seq and computational analysis using temporal mixture modelling resolves Th1/Tfh fate bifurcation in malaria
T Lönnberg, V Svensson, KR James, D Fernandez-Ruiz, I Sebina, ...
Science immunology 2 (9), 2017
1072017
Single-cell RNA-sequencing reveals a continuous spectrum of differentiation in hematopoietic cells
IC Macaulay, V Svensson, C Labalette, L Ferreira, F Hamey, T Voet, ...
Cell reports 14 (4), 966-977, 2016
842016
MERVL/Zscan4 network activation results in transient genome-wide DNA demethylation of mESCs
MA Eckersley-Maslin, V Svensson, C Krueger, TM Stubbs, P Giehr, ...
Cell Reports 17 (1), 179-192, 2016
512016
Computational approaches for interpreting scRNA‐seq data
R Rostom, V Svensson, SA Teichmann, G Kar
FEBS letters 591 (15), 2213-2225, 2017
412017
Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation
V Proserpio, A Piccolo, L Haim-Vilmovsky, G Kar, T Lönnberg, ...
Genome biology 17 (1), 103, 2016
392016
Single-cell analysis at the threshold
X Chen, JC Love, NE Navin, L Pachter, MJT Stubbington, V Svensson, ...
Nature biotechnology 34 (11), 1111, 2016
392016
An atlas of mouse CD4+ T cell transcriptomes
MJT Stubbington, B Mahata, V Svensson, A Deonarine, JK Nissen, ...
Biology direct 10 (1), 14, 2015
342015
SpatialDE: identification of spatially variable genes
V Svensson, SA Teichmann, O Stegle
Nature Methods 15 (5), 343, 2018
282018
Single-cell RNA-sequencing resolves self-antigen expression during mTEC development
RJ Miragaia, X Zhang, T Gomes, V Svensson, T Ilicic, J Henriksson, G Kar, ...
Scientific reports 8 (1), 685, 2018
82018
RNA Velocity: Molecular Kinetics from Single-Cell RNA-Seq
V Svensson, L Pachter
Molecular cell 72 (1), 7-9, 2018
32018
Droplet scRNA-seq is not zero-inflated
V Svensson
bioRxiv, 582064, 2019
22019
Single-cell transcriptomics identifies CD44 as a new marker and regulator of haematopoietic stem cells development
M Oatley, Ö Vargel Bölükbası, V Svensson, M Shvartsman, K Ganter, ...
22018
Curvatures of Lie groups
V Svensson
Bachelor’s thesis, Lund University. http://www. matematik. lu. se …, 2009
22009
RNA velocity and protein acceleration from single-cell multiomics experiments
G Gorin, V Svensson, L Pachter
12019
A method for transcriptome‐wide gene expression quantification in intact tissues
V Svensson
Immunology and cell biology 97 (5), 439-441, 2019
12019
Using single-cell RNA-seq to lineage trace effector to memory transitions in CD4+ T cells during malaria
SFM Soon, J Engel, J Lee, K James, T Lonnberg, V Svensson, ...
The Journal of Immunology 202 (1 Supplement), 186.1-186.1, 2019
2019
Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq
V Svensson, E da Veiga Beltrame, L Pachter
BioRxiv, 762773, 2019
2019
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Articles 1–20