Jessica Severin
Jessica Severin
Verified email at gsc.riken.jp - Homepage
TitleCited byYear
Finishing the euchromatic sequence of the human genome
International Human Genome Sequencing Consortium
Nature 431 (7011), 931, 2004
36422004
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
International Chicken Genome Sequencing Consortium
Nature 432 (7018), 695, 2004
22112004
A conditional knockout resource for the genome-wide study of mouse gene function
WC Skarnes, B Rosen, AP West, M Koutsourakis, W Bushell, V Iyer, ...
Nature 474 (7351), 337, 2011
10192011
Ensembl 2007
TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ...
Nucleic acids research 35 (suppl_1), D610-D617, 2006
9472006
EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
AJ Vilella, J Severin, A Ureta-Vidal, L Heng, R Durbin, E Birney
Genome research 19 (2), 327-335, 2009
9092009
A promoter-level mammalian expression atlas
ARR Forrest, H Kawaji, M Rehli, JK Baillie, MJL De Hoon, V Haberle, ...
Nature 507 (7493), 462, 2014
6762014
Ensembl 2005
T Hubbard, D Andrews, M Cáccamo, G Cameron, Y Chen, M Clamp, ...
Nucleic acids research 33 (suppl_1), D447-D453, 2005
5452005
Ensembl 2006
E Birney, D Andrews, M Cáccamo, Y Chen, L Clarke, G Coates, T Cox, ...
Nucleic acids research 34 (suppl_1), D556-D561, 2006
4642006
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
H Suzuki, ARR Forrest, E Van Nimwegen, CO Daub, PJ Balwierz, ...
Nature genetics 41 (5), 553, 2009
3862009
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
3342015
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199, 2017
3172017
Gateways to the FANTOM5 promoter level mammalian expression atlas
M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ...
Genome biology 16 (1), 22, 2015
2992015
Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan
C Plessy, N Bertin, H Takahashi, R Simone, M Salimullah, T Lassmann, ...
Nature methods 7 (7), 528, 2010
1232010
Interactive visualization and analysis of large-scale sequencing datasets using ZENBU
J Severin, M Lizio, J Harshbarger, H Kawaji, CO Daub, Y Hayashizaki, ...
Nature biotechnology 32 (3), 217, 2014
1062014
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872, 2017
1052017
A whole-genome shotgun optical map of Yersinia pestis strain KIM
S Zhou, W Deng, TS Anantharaman, A Lim, ET Dimalanta, J Wang, T Wu, ...
Appl. Environ. Microbiol. 68 (12), 6321-6331, 2002
772002
The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation
H Kawaji, J Severin, M Lizio, A Waterhouse, S Katayama, KM Irvine, ...
Genome biology 10 (4), R40, 2009
762009
Single-molecule approach to bacterial genomic comparisons via optical mapping
S Zhou, A Kile, M Bechner, M Place, E Kvikstad, W Deng, J Wei, J Severin, ...
Journal of bacteriology 186 (22), 7773-7782, 2004
752004
Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation
H Morikawa, N Ohkura, A Vandenbon, M Itoh, S Nagao-Sato, H Kawaji, ...
Proceedings of the National Academy of Sciences 111 (14), 5289-5294, 2014
742014
A software system for data analysis in automated DNA sequencing
MC Giddings, J Severin, M Westphall, J Wu, LM Smith
Genome Research 8 (6), 644-665, 1998
721998
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