| The structural basis of antibody-antigen recognition I Sela-Culang, V Kunik, Y Ofran Frontiers in immunology 4, 302, 2013 | 693 | 2013 |
| Analysing six types of protein–protein interfaces Y Ofran, B Rost Journal of molecular biology 325 (2), 377-387, 2003 | 551 | 2003 |
| Automatic prediction of protein function B Rost, J Liu, R Nair, KO Wrzeszczynski, Y Ofran Cellular and Molecular Life Sciences CMLS 60, 2637-2650, 2003 | 350 | 2003 |
| ISIS: interaction sites identified from sequence Y Ofran, B Rost Bioinformatics 23 (2), e13-e16, 2007 | 344 | 2007 |
| Predicted protein–protein interaction sites from local sequence information Y Ofran, B Rost FEBS letters 544 (1-3), 236-239, 2003 | 342 | 2003 |
| Protein–protein interaction hotspots carved into sequences Y Ofran, B Rost PLoS computational biology 3 (7), e119, 2007 | 314 | 2007 |
| Towards a consensus on datasets and evaluation metrics for developing B‐cell epitope prediction tools JA Greenbaum, PH Andersen, M Blythe, HH Bui, RE Cachau, J Crowe, ... Journal of Molecular Recognition: An Interdisciplinary Journal 20 (2), 75-82, 2007 | 297 | 2007 |
| Prediction of DNA-binding residues from sequence Y Ofran, V Mysore, B Rost Bioinformatics 23 (13), i347-i353, 2007 | 208 | 2007 |
| How far from the SNP may the causative genes be? A Brodie, JR Azaria, Y Ofran Nucleic acids research 44 (13), 6046-6054, 2016 | 200 | 2016 |
| Structural consensus among antibodies defines the antigen binding site V Kunik, B Peters, Y Ofran PLoS computational biology 8 (2), e1002388, 2012 | 198 | 2012 |
| Paratome: an online tool for systematic identification of antigen-binding regions in antibodies based on sequence or structure V Kunik, S Ashkenazi, Y Ofran Nucleic acids research 40 (W1), W521-W524, 2012 | 173 | 2012 |
| Land degradation is not a necessary outcome of communal pastoralism in arid Namibia D Ward, BT Ngairorue, J Kathena, R Samuels, Y Ofran Journal of Arid Environments 40 (4), 357-371, 1998 | 151 | 1998 |
| The rough guide to in silico function prediction, or how to use sequence and structure information to predict protein function M Punta, Y Ofran PLoS computational biology 4 (10), e1000160, 2008 | 143 | 2008 |
| A systematic comparison of free and bound antibodies reveals binding-related conformational changes I Sela-Culang, S Alon, Y Ofran The Journal of Immunology 189 (10), 4890-4899, 2012 | 132 | 2012 |
| Epitome: database of structure-inferred antigenic epitopes A Schlessinger, Y Ofran, G Yachdav, B Rost Nucleic acids research 34 (suppl_1), D777-D780, 2006 | 114 | 2006 |
| The indistinguishability of epitopes from protein surface is explained by the distinct binding preferences of each of the six antigen-binding loops V Kunik, Y Ofran Protein Engineering, Design & Selection 26 (10), 599-609, 2013 | 104 | 2013 |
| Automated identification of complementarity determining regions (CDRs) reveals peculiar characteristics of CDRs and B cell epitopes Y Ofran, A Schlessinger, B Rost The Journal of Immunology 181 (9), 6230-6235, 2008 | 103 | 2008 |
| Beyond annotation transfer by homology: novel protein-function prediction methods to assist drug discovery Y Ofran, M Punta, R Schneider, B Rost Drug discovery today 10 (21), 1475-1482, 2005 | 103 | 2005 |
| Antibody specific epitope prediction—emergence of a new paradigm I Sela-Culang, Y Ofran, B Peters Current opinion in virology 11, 98-102, 2015 | 90 | 2015 |
| Computational design of epitope-specific functional antibodies G Nimrod, S Fischman, M Austin, A Herman, F Keyes, O Leiderman, ... Cell reports 25 (8), 2121-2131. e5, 2018 | 77 | 2018 |
