Tim Nugent
Tim Nugent
Senior Research Scientist, Refinitiv
Verified email at refinitiv.com - Homepage
TitleCited byYear
Scalable web services for the PSIPRED Protein Analysis Workbench
DWA Buchan, F Minneci, TCO Nugent, K Bryson, DT Jones
Nucleic acids research 41 (W1), W349-W357, 2013
11002013
Protein annotation and modelling servers at University College London
DWA Buchan, SM Ward, AE Lobley, TCO Nugent, K Bryson, DT Jones
Nucleic acids research 38 (suppl 2), W563-W568, 2010
4122010
Transmembrane protein topology prediction using support vector machines
T Nugent, D Jones
BMC bioinformatics 10 (1), 159, 2009
3452009
Accurate de novo structure prediction of large transmembrane protein domains using fragment-assembly and correlated mutation analysis
T Nugent, DT Jones
Proceedings of the National Academy of Sciences 109 (24), E1540-E1547, 2012
1712012
Evaluation of predictions in the CASP10 model refinement category
T Nugent, D Cozzetto, DT Jones
Proteins: Structure, Function, and Bioinformatics 82, 98-111, 2014
752014
Improving data transparency in clinical trials using blockchain smart contracts
T Nugent, D Upton, M Cimpoesu
F1000Research 5, 2016
662016
Predicting transmembrane helix packing arrangements using residue contacts and a force-directed algorithm
T Nugent, DT Jones
PLoS computational biology 6 (3), e1000714, 2010
572010
FFPred: an integrated feature-based function prediction server for vertebrate proteomes
AE Lobley, T Nugent, CA Orengo, DT Jones
Nucleic acids research 36 (suppl 2), W297-W302, 2008
552008
GH responsiveness in a large multinational cohort of SGA children with short stature (NESTEGG) is related to the exon 3 GHR polymorphism
M Tauber, W Ester, F Auriol, C Molinas, J Fauvel, J Caliebe, T Nugent, ...
Clinical endocrinology 67 (3), 457-461, 2007
552007
Detecting pore-lining regions in transmembrane protein sequences
T Nugent, DT Jones
BMC bioinformatics 13 (1), 169, 2012
522012
Membrane protein structural bioinformatics
T Nugent, DT Jones
Journal of structural biology 179 (3), 327-337, 2012
462012
The transmembrane topology of Batten disease protein CLN3 determined by consensus computational prediction constrained by experimental data
T Nugent, SE Mole, DT Jones
FEBS letters 582 (7), 1019-1024, 2008
442008
Membrane protein orientation and refinement using a knowledge-based statistical potential
T Nugent, DT Jones
BMC bioinformatics 14 (1), 276, 2013
412013
The MEMPACK alpha-helical transmembrane protein structure prediction server
T Nugent, S Ward, DT Jones
Bioinformatics 27 (10), 1438, 2011
332011
Cosegregation of a novel homozygous CYP11B1 mutation with the phenotype of non-classical congenital adrenal hyperplasia in a consanguineous family
CJ Peters, T Nugent, LA Perry, K Davies, Y Morel, WM Drake, MO Savage, ...
Hormone Research in Paediatrics 67 (4), 189-193, 2007
322007
Proton-dependent gating and proton uptake by Wzx support O-antigen-subunit antiport across the bacterial inner membrane
ST Islam, PDW Eckford, ML Jones, T Nugent, CE Bear, C Vogel, JS Lam
MBio 4 (5), e00678-13, 2013
302013
Conserved-residue mutations in Wzy affect O-antigen polymerization and Wzz-mediated chain-length regulation in Pseudomonas aeruginosa PAO1
ST Islam, SM Huszczynski, T Nugent, AC Gold, JS Lam
Scientific reports 3, 3441, 2013
242013
Computational drug repositioning based on side-effects mined from social media
T Nugent, V Plachouras, JL Leidner
PeerJ Computer Science 2, e46, 2016
142016
De novo membrane protein structure prediction
T Nugent
Molecular Modeling of Proteins, 331-350, 2015
82015
Pharmacovigilance systems and methods utilizing cascading filters and machine learning models to classify and discern pharmaceutical trends from social media posts
AG Garrow, JL Leidner, V Plachouras, TCO Nugent
US Patent App. 14/861,714, 2016
52016
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