Colin Batchelor

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Janna HastingsUCL, OvGU Magdeburg (from August 2022: HSG, UZH)Verified email at ucl.ac.uk
Maria LiakataProfessor Queen Mary University of London/University of Warwick, Alan Turing Institute AI FellowVerified email at qmul.ac.uk
Simone TeufelProfessor of Computer Science, Cambridge UniversityVerified email at cl.cam.ac.uk
Christoph SteinbeckFriedrich-Schiller-University JenaVerified email at uni-jena.de
Karen EilbeckProfessor, Biomedical Informatics, University of UtahVerified email at genetics.utah.edu
Christopher J MungallLawrence Berkeley National LaboratoryVerified email at lbl.gov
Advaith SiddharthanProfessor of Computer Science and Society, Knowledge Media Institute, The Open UniversityVerified email at open.ac.uk
Michel DumontierDistinguished Professor of Data Science, Maastricht UniversityVerified email at maastrichtuniversity.nl
Peter CorbettRoyal Society of ChemistryVerified email at rsc.org
Simon DobnikProfessor of Computational Linguistics, Gothenburg UniversityVerified email at gu.se
Dietrich Rebholz-SchuhmannZB MED -- Information Center for Life SciencesVerified email at zbmed.de
Egon WillighagenAssistant Professor at BiGCaT, Maastricht University The Netherlands, ORCID:0000-0001-7542-0286Verified email at maastrichtuniversity.nl
Robert StevensProfessor of Computer Science, Department of Computer Science, university of manchesterVerified email at manchester.ac.uk
Jane S. RichardsonProfessor of Biochemistry, Duke UniversityVerified email at duke.edu
Thomas BittnerProfessor of Philosophy and Geography, State University of New York at BuffaloVerified email at buffalo.edu
Neocles B. LeontisBowling Green State universityVerified email at bgsu.edu
Antony John Williams, 0000-0002-266...Center of Computational Toxicology and Exposure, Environmental Protection AgencyVerified email at epa.gov
Valery TkachenkoPresident, Science Data ExpertsVerified email at sciencedataexperts.com
Lee HarlandFounder, SciBite LimitedVerified email at scibite.com
Lincoln SteinDirector of Informatics and Biocomputing, Ontario Institute for Cancer Research Verified email at oicr.on.ca

Colin Batchelor

Royal Society of Chemistry, UK

Verified email at rsc.org


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Towards domain-independent argumentative zoning: Evidence from chemistry and computational linguistics S Teufel, A Siddharthan, C Batchelor Proceedings of the 2009 conference on empirical methods in natural language …, 2009	208	2009
Automatic recognition of conceptualization zones in scientific articles and two life science applications M Liakata, S Saha, S Dobnik, C Batchelor, D Rebholz-Schuhmann Bioinformatics 28 (7), 991-1000, 2012	181	2012
Corpora for the conceptualisation and zoning of scientific papers M Liakata, S Teufel, A Siddharthan, C Batchelor	155	2010
The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside JS Luciano, B Andersson, C Batchelor, O Bodenreider, T Clark, ... Journal of biomedical semantics 2 (2), 1-21, 2011	102	2011
A standard variation file format for human genome sequences MG Reese, B Moore, C Batchelor, F Salas, F Cunningham, GT Marth, ... Genome biology 11 (8), 1-9, 2010	98	2010
Evolution of the Sequence Ontology terms and relationships CJ Mungall, C Batchelor, K Eilbeck Journal of biomedical informatics 44 (1), 87-93, 2011	96	2011
Annotation of chemical named entities P Corbett, C Batchelor, S Teufel Biological, translational, and clinical language processing, 57-64, 2007	95	2007
PubChemRDF: towards the semantic annotation of PubChem compound and substance databases G Fu, C Batchelor, M Dumontier, J Hastings, E Willighagen, E Bolton Journal of Cheminformatics 7, 34, 2015	82	2015
Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology DP Hill, N Adams, M Bada, C Batchelor, TZ Berardini, H Dietze, ... BMC genomics 14 (1), 1-10, 2013	58	2013
Structure-based classification and ontology in chemistry J Hastings, D Magka, C Batchelor, L Duan, R Stevens, M Ennis, ... Journal of cheminformatics 4 (1), 1-20, 2012	53	2012
The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data R Hoehndorf, C Batchelor, T Bittner, M Dumontier, K Eilbeck, R Knight, ... Applied Ontology 6 (1), 53-89, 2011	48	2011
A discourse-driven content model for summarising scientific articles evaluated in a complex question answering task M Liakata, S Dobnik, S Saha, C Batchelor, DR Schuhmann Proceedings of the 2013 Conference on Empirical Methods in Natural Language …, 2013	43	2013
Semantic enrichment of journal articles using chemical named entity recognition C Batchelor, P Corbett Proceedings of the 45th Annual Meeting of the Association for Computational …, 2007	33	2007
Scientific lenses to support multiple views over linked chemistry data C Batchelor, CYA Brenninkmeijer, C Chichester, M Davies, D Digles, ... International Semantic Web Conference, 98-113, 2014	27	2014
The Chemical Validation and Standardization Platform (CVSP): large-scale automated validation of chemical structure datasets K Karapetyan, C Batchelor, D Sharpe, V Tkachenko, AJ Williams Journal of Cheminformatics 7, 30, 2015	25	2015
Ontological dependence, dispositions and institutional reality in chemistry C Batchelor, J Hastings, C Steinbeck Formal Ontology in Information Systems, 271-284, 2010	20	2010
The Translational Medicine Ontology: Driving personalized medicine by bridging the gap from bedside to bench M Dumontier, B Andersson, C Batchelor, C Denney, C Domarew, ... Proceedings of the 13th Annual Bio-Ontologies Meeting, Boston, USA. Bio …, 2010	17	2010
The RNA Ontology (RNAO): An ontology for integrating RNA sequence and structure data C Batchelor, T Bittner, K Eilbeck, C Mungall, J Richardson, R Knight, ... Nature Precedings, 1-1, 2009	11	2009
Parts and Wholes, Shapes and Holes in Living Beings. J Hastings, CR Batchelor, S Schulz SHAPES, 2011	9	2011
What are chemical structures and their relations? J Hastings, C Batchelor, C Steinbeck, S Schulz Formal Ontology in Information Systems, 257-270, 2010	8	2010

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