| Defining a minimal cell: essentiality of small ORF s and nc RNA s in a genome‐reduced bacterium M Lluch‐Senar, J Delgado, WH Chen, V Lloréns‐Rico, FJ O'Reilly, ... Molecular systems biology 11 (1), 780, 2015 | 155 | 2015 |
| Bacterial antisense RNAs are mainly the product of transcriptional noise V Lloréns-Rico, J Cano, T Kamminga, R Gil, A Latorre, WH Chen, P Bork, ... Science advances 2 (3), e1501363, 2016 | 117 | 2016 |
| Comprehensive Methylome Characterization of Mycoplasma genitalium and Mycoplasma pneumoniae at Single-Base Resolution M Lluch-Senar, K Luong, V Llorens-Rico, J Delgado, G Fang, K Spittle, ... PLoS genetics 9 (1), e1003191, 2013 | 114 | 2013 |
| Integrated culturing, modeling and transcriptomics uncovers complex interactions and emergent behavior in a three-species synthetic gut community K D'hoe, S Vet, K Faust, F Moens, G Falony, D Gonze, V Lloréns-Rico, ... Elife 7, e37090, 2018 | 99 | 2018 |
| Comparative “-omics” in Mycoplasma pneumoniae clinical isolates reveals key virulence factors M Lluch-Senar, L Cozzuto, J Cano, J Delgado, V Llórens-Rico, S Pereyre, ... PLoS One 10 (9), e0137354, 2015 | 56 | 2015 |
| Clinical practices underlie COVID-19 patient respiratory microbiome composition and its interactions with the host V Lloréns-Rico, AC Gregory, J Van Weyenbergh, S Jansen, T Van Buyten, ... Nature communications 12 (1), 1-12, 2021 | 51 | 2021 |
| Determination of the gene regulatory network of a genome-reduced bacterium highlights alternative regulation independent of transcription factors E Yus, V Llorens-Rico, S Martinez, C Gallo, H Eilers, C Bloetz, J Stuelke, ... Cell Systems 9 (2), 143-158. e13, 2019 | 46 | 2019 |
| Insights into the mechanisms of basal coordination of transcription using a genome-reduced bacterium I Junier, EB Unal, E Yus, V Lloréns-Rico, L Serrano Cell systems 2 (6), 391-401, 2016 | 44 | 2016 |
| Single-cell approaches in human microbiome research V Lloréns-Rico, JA Simcock, GRB Huys, J Raes Cell 185 (15), 2725-2738, 2022 | 40 | 2022 |
| Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases V Lloréns-Rico, S Vieira-Silva, PJ Gonçalves, G Falony, J Raes Nature communications 12 (1), 3562, 2021 | 39 | 2021 |
| Distinguishing between productive and abortive promoters using a random forest classifier in Mycoplasma pneumoniae V Llorens-Rico, M Lluch-Senar, L Serrano Nucleic acids research 43 (7), 3442-3453, 2015 | 27 | 2015 |
| The yin–yang of kinase activation and unfolding explains the peculiarity of Val600 in the activation segment of BRAF C Kiel, H Benisty, V Llorens-Rico, L Serrano Elife 5, e12814, 2016 | 26 | 2016 |
| Tracking humans and microbes V Lloréns-Rico, J Raes Nature 569 (7758), 632-633, 2019 | 18 | 2019 |
| Alternative transcriptional regulation in genome-reduced bacteria S Miravet-Verde, V Lloréns-Rico, L Serrano Current opinion in microbiology 39, 89-95, 2017 | 17 | 2017 |
| Endogenous IFNβ expression predicts outcome in critical patients with COVID-19 SM Menezes, M Braz, V Llorens-Rico, J Wauters, J Van Weyenbergh The Lancet Microbe 2 (6), e235-e236, 2021 | 13* | 2021 |
| Assessing the hodgepodge of non-mapped reads in bacterial transcriptomes: real or artifactual RNA chimeras? V Llorens-Rico, L Serrano, M Lluch-Senar BMC genomics 15, 1-11, 2014 | 9 | 2014 |
| Correction: Integrated culturing, modeling and transcriptomics uncovers complex interactions and emergent behavior in a three-species synthetic gut community K D'hoe, S Vet, K Faust, F Moens, G Falony, D Gonze, V Lloréns-Rico, ... Elife 8, e53217, 2019 | 2 | 2019 |
| 578P Tissue-resident microbiota characterization in colorectal cancer metastases P Stevens, V Llorens-Rico, E Benidovskaya, P Baldin, L Coubeau, ... Annals of Oncology 34, S423, 2023 | | 2023 |
| SO-26 Identification and quantification of the microbiome in colorectal cancer metastases P Stevens, V Llorens-Rico, P Baldin, S Gofflot, L Craciun, G Fabienne, ... Annals of Oncology 33, S367-S368, 2022 | | 2022 |
| Mechanical ventilation affects respiratory microbiome of COVID-19 patients and its interactions with the host (preprint) V Lloréns-Rico, AC Gregory, J Van Weyenbergh, S Jansen, T Van Buyten, ... | | 2020 |
