Julio R. Banga ( ORCID 0000-0002-4245-0320 )

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Antonio A. AlonsoProfesor CSIC Instituto Investigaciones MarinasVerified email at iim.csic.es
Eva Balsa CantoIIM-CSICVerified email at iim.csic.es
Alejandro F. VillaverdeUniversidade de VigoVerified email at uvigo.gal
Jose A. EgeaTenured Researcher, CEBAS-CSICVerified email at cebas.csic.es
Maria Rodriguez-FernandezAssociate Professor, Pontificia Universidad Catolica de ChileVerified email at uc.cl
Irene Otero-MurasInstitute for Integrative Systems Biology. Spanish Council for Scientific ResearchVerified email at csic.es
Carlos Vilas(Bio)Process Engineering Group, IIM-CSICVerified email at iim.csic.es
Míriam R. GarcíaTenured Scientist. Biosystems & Bioprocess Engineering. IIM-CSICVerified email at iim.csic.es
Ramon DoalloComputer Architecture Group, CITIC, University of A CoruñaVerified email at udc.es
Patricia González GómezUniversidade da Coruña - Centro de investigación CITICVerified email at udc.es
Jan Van ImpeKU LeuvenVerified email at kuleuven.be
Pedro MendesUniversity of ConnecticutVerified email at uchc.edu
David Saque HenriquesPost-Doctoral Researcher, IIM-CSICVerified email at iim.csic.es
Julio Saez RodriguezHeidelberg UniversityVerified email at bioquant.uni-heidelberg.de
Attila GaborComputational Biomedicine, Heidelberg UniversityVerified email at uni-heidelberg.de
David R. PenasPostdoctoral researcher, MBG-CSICVerified email at csic.es
R. Paul SinghProfessor of Food Engineering, University of California, DavisVerified email at ucdavis.edu
Xoán C. PardoUniversidade da Coruña (UDC). CITIC. Grupo de Arquitectura de Computadores (GAC).Verified email at udc.gal
Bart NicolaiProfessor of Biosystems Engineering, KU LeuvenVerified email at kuleuven.be
Klaus MauchInsilico Biotechnology AGVerified email at insilico-biotechnology.com

Julio R. Banga ( ORCID 0000-0002-4245-0320 )

Research Professor, MBG-CSIC, Pontevedra (Spain)

Verified email at csic.es - Homepage

computational systems biology synthetic biology bioprocess engineering global optimization modeling


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Parameter estimation in biochemical pathways: a comparison of global optimization methods CG Moles, P Mendes, JR Banga Genome research 13 (11), 2467-2474, 2003	1082	2003
Structural identifiability of systems biology models: a critical comparison of methods OT Chis, JR Banga, E Balsa-Canto PloS one 6 (11), e27755, 2011	389	2011
A hybrid approach for efficient and robust parameter estimation in biochemical pathways M Rodriguez-Fernandez, P Mendes, JR Banga Biosystems 83 (2-3), 248-265, 2006	388	2006
Novel metaheuristic for parameter estimation in nonlinear dynamic biological systems M Rodriguez-Fernandez, JA Egea, JR Banga BMC bioinformatics 7 (1), 1-18, 2006	358	2006
Optimization in computational systems biology JR Banga BMC systems biology 2 (1), 1-7, 2008	325	2008
Reverse engineering and identification in systems biology: strategies, perspectives and challenges AF Villaverde, JR Banga Journal of the Royal Society Interface 11 (91), 20130505, 2014	258	2014
Extended ant colony optimization for non-convex mixed integer nonlinear programming M Schlüter, JA Egea, JR Banga Computers & Operations Research 36 (7), 2217-2229, 2009	252	2009
Dynamic optimization of bioprocesses: Efficient and robust numerical strategies JR Banga, E Balsa-Canto, CG Moles, AA Alonso Journal of biotechnology 117 (4), 407-419, 2005	247	2005
Improving food processing using modern optimization methods JR Banga, E Balsa-Canto, CG Moles, AA Alonso Trends in food science & Technology 14 (4), 131-144, 2003	226	2003
Scatter search for chemical and bio-process optimization JA Egea, M Rodríguez-Fernández, JR Banga, R Marti Journal of Global Optimization 37 (3), 481-503, 2007	213	2007
An iterative identification procedure for dynamic modeling of biochemical networks E Balsa-Canto, AA Alonso, JR Banga BMC systems biology 4 (1), 1-18, 2010	199	2010
Optimization of the thermal processing of conduction-heated canned foods: study of several objective functions JR Banga, RI Perez-Martin, JM Gallardo, JJ Casares Journal of food engineering 14 (1), 25-51, 1991	183	1991
Parameter estimation and optimal experimental design O Wolkenhauer, P Wellstead, KH Cho, JR Banga, E Balsa-Canto Essays in biochemistry 45, 195-210, 2008	160	2008
Global optimization of chemical processes using stochastic algorithms JR Banga, WD Seider State of the art in global optimization, 563-583, 1996	159	1996
MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics JA Egea, D Henriques, T Cokelaer, AF Villaverde, A MacNamara, ... BMC bioinformatics 15 (1), 1-9, 2014	153	2014
An evolutionary method for complex-process optimization JA Egea, R Martí, JR Banga Computers & Operations Research 37 (2), 315-324, 2010	146	2010
Computational procedures for optimal experimental design in biological systems E Balsa-Canto, AA Alonso, JR Banga IET systems biology 2 (4), 163-172, 2008	139	2008
Dynamic optimization of nonlinear processes with an enhanced scatter search method JA Egea, E Balsa-Canto, MSG García, JR Banga Industrial & Engineering Chemistry Research 48 (9), 4388-4401, 2009	137	2009
Robust and efficient parameter estimation in dynamic models of biological systems A Gábor, JR Banga BMC systems biology 9 (1), 1-25, 2015	132	2015
Dynamic optimization of batch reactors using adaptive stochastic algorithms EF Carrasco, JR Banga Industrial & engineering chemistry research 36 (6), 2252-2261, 1997	132	1997

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