| TopPIC: a software tool for top-down mass spectrometry-based proteoform identification and characterization Q Kou, L Xun, X Liu Bioinformatics 32 (22), 3495-3497, 2016 | 194 | 2016 |
| Deep Top-Down Proteomics Using Capillary Zone Electrophoresis-Tandem Mass Spectrometry: Identification of 5700 Proteoforms from the Escherichia coli Proteome EN McCool, RA Lubeckyj, X Shen, D Chen, Q Kou, X Liu, L Sun Analytical chemistry 90 (9), 5529-5533, 2018 | 109 | 2018 |
| Single-shot top-down proteomics with capillary zone electrophoresis-electrospray ionization-tandem mass spectrometry for identification of nearly 600 Escherichia coli proteoforms RA Lubeckyj, EN McCool, X Shen, Q Kou, X Liu, L Sun Analytical chemistry 89 (22), 12059-12067, 2017 | 87 | 2017 |
| De Novo Protein Sequencing by Combining Top-Down and Bottom-Up Tandem Mass Spectra X Liu, LJM Dekker, S Wu, MM Vanduijn, TM Luider, N Tolić, Q Kou, ... Journal of proteome research 13 (7), 3241-3248, 2014 | 65 | 2014 |
| Native proteomics in discovery mode using size-exclusion chromatography–capillary zone electrophoresis–tandem mass spectrometry X Shen, Q Kou, R Guo, Z Yang, D Chen, X Liu, H Hong, L Sun Analytical chemistry 90 (17), 10095-10099, 2018 | 59 | 2018 |
| Simplicity of kmeans versus deepness of deep learning: A case of unsupervised feature learning with limited data M Dundar, Q Kou, B Zhang, Y He, B Rajwa 2015 IEEE 14th International Conference on Machine Learning and Applications …, 2015 | 37 | 2015 |
| Quantitative top-down proteomics in complex samples using protein-level tandem mass tag labeling D Yu, Z Wang, KA Cupp-Sutton, Y Guo, Q Kou, K Smith, X Liu, S Wu Journal of the American Society for Mass Spectrometry 32 (6), 1336-1344, 2021 | 30 | 2021 |
| A mass graph-based approach for the identification of modified proteoforms using top-down tandem mass spectra Q Kou, S Wu, N Tolić, L Paša-Tolić, Y Liu, X Liu Bioinformatics 33 (9), 1309-1316, 2017 | 30 | 2017 |
| Characterization of proteoforms with unknown post-translational modifications using the MIScore Q Kou, B Zhu, S Wu, C Ansong, N Tolic, L Paša-Tolić, X Liu Journal of proteome research 15 (8), 2422-2432, 2016 | 24 | 2016 |
| Large-scale top-down proteomics using capillary zone electrophoresis tandem mass spectrometry EN McCool, R Lubeckyj, X Shen, Q Kou, X Liu, L Sun JoVE (Journal of Visualized Experiments), e58644, 2018 | 21 | 2018 |
| A new scoring function for top-down spectral deconvolution Q Kou, S Wu, X Liu BMC genomics 15, 1-10, 2014 | 20 | 2014 |
| digest: Create compact hash digests of R objects D Eddelbuettel, A Lucas, J Tuszynski, H Bengtsson, S Urbanek, M Frasca, ... R package version 0.6 27, 2018 | 13 | 2018 |
| Systematic Evaluation of Protein Sequence Filtering Algorithms for Proteoform Identification Using Top‐Down Mass Spectrometry Q Kou, S Wu, X Liu Proteomics 18 (3-4), 1700306, 2018 | 11 | 2018 |
| Rcpp: Seamless R and C++ Integration. R package version 1.0. 3 D Eddelbuettel, R Francois, J Allaire, K Ushey, Q Kou, N Russell, D Bates, ... | 6 | 2019 |
| A spectrum graph-based protein sequence filtering algorithm for proteoform identification by top-down mass spectrometry R Yang, D Zhu, Q Kou, P Bhat-Nakshatri, H Nakshatri, S Wu, X Liu 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2017 | 5 | 2017 |
| Evaluation of top-down mass spectral identification with homologous protein sequences Z Li, B He, Q Kou, Z Wang, S Wu, Y Liu, W Feng, X Liu BMC bioinformatics 19 (17), 21-28, 2018 | 4 | 2018 |
| Package ‘Rcpp’ D Eddelbuettel, R Francois, JJ Allaire, K Ushey, Q Kou, N Russell, ... | 3 | 2023 |
| A markov chain Monte Carlo method for estimating the statistical significance of proteoform identifications by top-down mass spectrometry Q Kou, Z Wang, RA Lubeckyj, S Wu, L Sun, X Liu Journal of proteome research 18 (3), 878-889, 2019 | 3 | 2019 |
| Package ‘digest’ D Eddelbuettel, A Lucas, J Tuszynski, H Bengtsson, S Urbanek, M Frasca, ... | 1 | 2023 |
| Mass graphs and their applications in top-down proteomics Q Kou, S Wu, N Tolić, L Pasa-Tolić, X Liu bioRxiv, 031997, 2015 | 1 | 2015 |
Xiaowen (Kevin) LiuDivision of Biomedical Informatics and Genomics, School of Medicine, Tulane UniversityVerified email at tulane.edu
