Casper Kaae Sønderby
Casper Kaae Sønderby
Research Scientist, Google Brain
Verified email at google.com - Homepage
TitleCited byYear
Ladder variational autoencoders
CK Sønderby, T Raiko, L Maaløe, SK Sønderby, O Winther
Advances in neural information processing systems, 3738-3746, 2016
307*2016
Auxiliary deep generative models
L Maaløe, CK Sønderby, SK Sønderby, O Winther
arXiv preprint arXiv:1602.05473, 2016
2532016
Amortised map inference for image super-resolution
CK Sønderby, J Caballero, L Theis, W Shi, F Huszár
arXiv preprint arXiv:1610.04490, 2016
2192016
BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis
FO Bagger, D Sasivarevic, SH Sohi, LG Laursen, S Pundhir, CK Sønderby, ...
Nucleic acids research 44 (D1), D917-D924, 2015
1252015
SignalP 5.0 improves signal peptide predictions using deep neural networks
JJA Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, O Winther, ...
Nature biotechnology 37 (4), 420, 2019
1172019
DeepLoc: prediction of protein subcellular localization using deep learning
JJ Almagro Armenteros, CK Sønderby, SK Sønderby, H Nielsen, ...
Bioinformatics 33 (21), 3387-3395, 2017
1162017
Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments
SN Jespersen, H Lundell, CK Sønderby, TB Dyrby
NMR in Biomedicine 26 (12), 1647-1662, 2013
1102013
Convolutional LSTM networks for subcellular localization of proteins
SK Sønderby, CK Sønderby, H Nielsen, O Winther
International Conference on Algorithms for Computational Biology, 68-80, 2015
692015
An introduction to deep learning on biological sequence data: examples and solutions
VI Jurtz, AR Johansen, M Nielsen, JJ Almagro Armenteros, H Nielsen, ...
Bioinformatics 33 (22), 3685-3690, 2017
402017
Recurrent spatial transformer networks
SK Sønderby, CK Sønderby, L Maaløe, O Winther
arXiv preprint arXiv:1509.05329, 2015
322015
NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning
MS Klausen, MC Jespersen, H Nielsen, KK Jensen, VI Jurtz, ...
Proteins: Structure, Function, and Bioinformatics 87 (6), 520-527, 2019
282019
Diffusion weighted imaging with circularly polarized oscillating gradients
H Lundell, CK Sønderby, TB Dyrby
Magnetic resonance in medicine 73 (3), 1171-1176, 2015
222015
Commentary on “Microanisotropy imaging: quantification of microscopic diffusion anisotropy and orientation of order parameter by diffusion MRI with magic-angle spinning of the …
SN Jespersen, H Lundell, CK Sønderby, TB Dyrby
Frontiers in Physics 2, 28, 2014
162014
scVAE: Variational auto-encoders for single-cell gene expression data
CH Grønbech, MF Vording, PN Timshel, CK Sønderby, TH Pers, ...
bioRxiv, 318295, 2018
142018
Tumor suppressor ASXL1 is essential for the activation of INK4B expression in response to oncogene activity and anti-proliferative signals
X Wu, IH Bekker-Jensen, J Christensen, KD Rasmussen, S Sidoli, Y Qi, ...
Cell research 25 (11), 1205, 2015
112015
Apparent exchange rate imaging in anisotropic systems
CK Sønderby, HM Lundell, LV Søgaard, TB Dyrby
Magnetic resonance in medicine 72 (3), 756-762, 2014
102014
Deep recurrent conditional random field network for protein secondary prediction
AR Johansen, CK Sønderby, SK Sønderby, O Winther
Proceedings of the 8th ACM International Conference on Bioinformatics …, 2017
82017
Erratum: Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments
SN Jespersen, H Lundell, CK Sønderby, TB Dyrby
NMR in Biomedicine (online) 27 (6), 738-738, 2014
72014
Neural machine translation with characters and hierarchical encoding
AR Johansen, JM Hansen, EK Obeid, CK Sønderby, O Winther
arXiv preprint arXiv:1610.06550, 2016
42016
Binning microbial genomes using deep learning
JN Nissen, CK Sonderby, JJA Armenteros, CH Groenbech, HB Nielsen, ...
BioRxiv, 490078, 2018
22018
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Articles 1–20