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Takeshi Baba
Takeshi Baba
Toray Industries, Inc.
Verified email at protein.rcast.u-tokyo.ac.jp - Homepage
Title
Cited by
Cited by
Year
An accurate density functional theory based estimation of p K a values of polar residues combined with experimental data: from amino acids to minimal proteins
T Matsui, T Baba, K Kamiya, Y Shigeta
Physical Chemistry Chemical Physics 14 (12), 4181-4187, 2012
782012
Simple, yet powerful methodologies for conformational sampling of proteins
R Harada, Y Takano, T Baba, Y Shigeta
Physical chemistry chemical physics 17 (9), 6155-6173, 2015
672015
A density functional study on the pKa of small polyprotic molecules
T Baba, T Matsui, K Kamiya, M Nakano, Y Shigeta
International Journal of Quantum Chemistry 114 (17), 1128-1134, 2014
372014
On the induced‐fit mechanism of substrate‐enzyme binding structures of nylon‐oligomer hydrolase
T Baba, R Harada, M Nakano, Y Shigeta
Journal of Computational Chemistry 35 (16), 1240-1247, 2014
262014
Theoretical study on reaction scheme of silver (I) containing 5-substituted uracils bridge formation
T Matsui, H Miyachi, T Baba, Y Shigeta
The Journal of Physical Chemistry A 115 (30), 8504-8510, 2011
182011
Nylon-oligomer hydrolase promoting cleavage reactions in unnatural amide compounds
K Kamiya, T Baba, M Boero, T Matsui, S Negoro, Y Shigeta
The Journal of Physical Chemistry Letters 5 (7), 1210-1216, 2014
152014
Molecular dynamics studies on the mutational structures of a nylon-6 byproduct-degrading enzyme
T Baba, K Kamiya, T Matsui, N Shibata, Y Higuchi, T Kobayashi, S Negoro, ...
Chemical Physics Letters 507 (1-3), 157-161, 2011
152011
Unraveling the degradation of artificial amide bonds in Nylon oligomer hydrolase: From induced-fit to acylation processes
T Baba, M Boero, K Kamiya, H Ando, S Negoro, M Nakano, Y Shigeta
Physical Chemistry Chemical Physics 17 (6), 4492 - 4504, 2014
122014
Discovery of attenuation effect of orexin 1 receptor to aversion of nalfurafine: Synthesis and evaluation of D-nor-nalfurafine derivatives and analyses of the three active …
Y Nagumo, K Katoh, K Iio, T Saitoh, N Kutsumura, N Yamamoto, ...
Bioorganic & Medicinal Chemistry Letters 30 (17), 127360, 2020
102020
Quantal cumulant mechanics and dynamics for multidimensional quantum many‐body clusters
Y Shigeta, T Inui, T Baba, K Okuno, H Kuwabara, R Kishi, M Nakano
International Journal of Quantum Chemistry 113 (3), 348-355, 2013
102013
Hydration effects on enzyme–substrate complex of nylon oligomer hydrolase: inter-fragment interaction energy study by the fragment molecular orbital method
H Ando, Y Shigeta, T Baba, C Watanabe, Y Okiyama, Y Mochizuki, ...
Molecular Physics 113 (3-4), 319-326, 2015
52015
Mutations affecting the internal equilibrium of the reaction catalyzed by 6‐aminohexanoate‐dimer hydrolase
S Negoro, Y Kawashima, N Shibata, T Kobayashi, T Baba, YH Lee, ...
FEBS letters 590 (18), 3133-3143, 2016
12016
Finite‐field method with unbiased polarizable continuum model for evaluation of the second hyperpolarizability of an open‐shell singlet molecule in solvents
T Inui, Y Shigeta, K Okuno, T Baba, R Kishi, M Nakano
Journal of Computational Chemistry 34 (27), 2345-2352, 2013
12013
Integrated Computational Studies on Mutational Effects of a Nylon-Degrading Enzyme
T Baba, K Kamiya, Y Shigeta
Quantum Systems in Physics, Chemistry, and Biology: Advances in Concepts and …, 2017
2017
1P042 Molecular dynamics studies on Mutational structures of a Nylon-6 Byproduct-degrading Enzyme (Protein: Structure & Function, The 48th Annual Meeting of the Biophysical …
T Baba, K Kamiya, S Negoro
Seibutsu Butsuri 50 (supplement2), S26, 2010
2010
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