S. Asad Rahman
S. Asad Rahman
BioInception Labs
Verified email at bioinceptionlabs.com
Cited by
Cited by
Small Molecule Subgraph Detector (SMSD) toolkit
SA Rahman, M Bashton, GL Holliday, R Schrader, JM Thornton
Journal of cheminformatics 1, 12, 2009
Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC)
SA Rahman, P Advani, R Schunk, R Schrader, D Schomburg
Bioinformatics 21 (7), 1189-1193, 2005
Observing local and global properties of metabolic pathways:‘load points’ and ‘choke points’ in the metabolic networks
SA Rahman, D Schomburg
Bioinformatics 22 (14), 1767-1774, 2006
EC-BLAST: a tool to automatically search and compare enzyme reactions
SA Rahman, SM Cuesta, N Furnham, GL Holliday, JM Thornton
Nature methods 11 (2), 171-174, 2014
The classification and evolution of enzyme function
SM Cuesta, SA Rahman, N Furnham, JM Thornton
Biophysical journal 109 (6), 1082-1086, 2015
MACiE: exploring the diversity of biochemical reactions
GL Holliday, C Andreini, JD Fischer, SA Rahman, DE Almonacid, ...
Nucleic acids research 40 (D1), D783-D789, 2012
Genomes of Helicobacter pylori from native Peruvians suggest admixture of ancestral and modern lineages and reveal a western type cag-pathogenicity island
SM Devi, I Ahmed, AA Khan, SA Rahman, A Alvi, LA Sechi, N Ahmed
BMC genomics 7 (1), 1-10, 2006
Comparative analyses of nonpathogenic, opportunistic, and totally pathogenic mycobacteria reveal genomic and biochemical variabilities and highlight the survival attributes of …
SA Rahman, Y Singh, S Kohli, J Ahmad, NZ Ehtesham, AK Tyagi, ...
MBio 5 (6), e02020-14, 2014
Reaction Decoder Tool (RDT): extracting features from chemical reactions
SA Rahman, G Torrance, L Baldacci, S Martínez Cuesta, F Fenninger, ...
Bioinformatics 32 (13), 2065-2066, 2016
Emerging genetic diversity among clinical isolates of SARS-CoV-2: Lessons for today
JA Sheikh, J Singh, H Singh, S Jamal, M Khubaib, S Kohli, U Dobrindt, ...
Infection, genetics and evolution 84, 104330, 2020
The structures and physicochemical properties of organic cofactors in biocatalysis
JD Fischer, GL Holliday, SA Rahman, JM Thornton
Journal of molecular biology 403 (5), 803-824, 2010
SARS-CoV-2 variants of concern are emerging in India
J Singh, SA Rahman, NZ Ehtesham, S Hira, SE Hasnain
Nature medicine, 1-3, 2021
Large-scale analysis exploring evolution of catalytic machineries and mechanisms in enzyme superfamilies
N Furnham, NL Dawson, SA Rahman, JM Thornton, CA Orengo
Journal of molecular biology 428 (2), 253-267, 2016
FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies
N Furnham, I Sillitoe, GL Holliday, AL Cuff, SA Rahman, RA Laskowski, ...
Nucleic acids research 40 (D1), D776-D782, 2012
Structure-function analyses of new SARS-CoV-2 variants B. 1.1. 7, B. 1.351 and B. 1.1. 28.1: clinical, diagnostic, therapeutic and public health implications
J Singh, J Samal, V Kumar, J Sharma, U Agrawal, NZ Ehtesham, ...
Viruses 13 (3), 439, 2021
Genome sequence based, comparative analysis of the fluorescent amplified fragment length polymorphisms (FAFLP) of tubercle bacilli from seals provides molecular evidence for a …
N Ahmed, M Alam, AA Majeed, SA Rahman, A Cataldi, D Cousins, ...
Infection, Genetics and Evolution 2 (3), 193-199, 2003
Dual direction CRISPR transcriptional regulation screening uncovers gene networks driving drug resistance
C le Sage, S Lawo, P Panicker, TME Scales, SA Rahman, AS Little, ...
Scientific reports 7 (1), 1-10, 2017
The evolution of enzyme function in the isomerases
SM Cuesta, N Furnham, SA Rahman, I Sillitoe, JM Thornton
Current opinion in structural biology 26, 121-130, 2014
Gene cooption in mycobacteria and search for virulence attributes: comparative proteomic analyses of Mycobacterium tuberculosis, Mycobacterium indicus pranii and other mycobacteria
Y Singh, S Kohli, DT Sowpati, SA Rahman, AK Tyagi, SE Hasnain
International Journal of Medical Microbiology 304 (5-6), 742-748, 2014
The EBI enzyme portal
R Alcantara, J Onwubiko, H Cao, P Matos, JA Cham, J Jacobsen, ...
Nucleic acids research 41 (D1), D773-D780, 2013
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