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Hagen Tilgner
Hagen Tilgner
Assistant professor of neurogenetics
Verified email at med.cornell.edu - Homepage
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Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
137752012
Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
54482012
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression
T Derrien, R Johnson, G Bussotti, A Tanzer, S Djebali, H Tilgner, ...
Genome research 22 (9), 1775-1789, 2012
52522012
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS biology 9 (4), e1001046, 2011
14402011
A single-molecule long-read survey of the human transcriptome
D Sharon, H Tilgner, F Grubert, M Snyder
Nature biotechnology 31 (11), 1009-1014, 2013
6322013
Nucleosome positioning as a determinant of exon recognition
H Tilgner, C Nikolaou, S Althammer, M Sammeth, M Beato, J Valcárcel, ...
Nature structural & molecular biology 16 (9), 996-1001, 2009
5412009
SynGO: an evidence-based, expert-curated knowledge base for the synapse
F Koopmans, P van Nierop, M Andres-Alonso, A Byrnes, T Cijsouw, ...
Neuron 103 (2), 217-234. e4, 2019
5292019
Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs
H Tilgner, DG Knowles, R Johnson, CA Davis, S Chakrabortty, S Djebali, ...
Genome research 22 (9), 1616-1625, 2012
5112012
Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells
I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ...
Nature biotechnology 36 (12), 1197-1202, 2018
2732018
Defining a personal, allele-specific, and single-molecule long-read transcriptome
H Tilgner, F Grubert, D Sharon, MP Snyder
Proceedings of the National Academy of Sciences 111 (27), 9869-9874, 2014
2652014
Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis
SME Sahraeian, M Mohiyuddin, R Sebra, H Tilgner, PT Afshar, KF Au, ...
Nature communications 8 (1), 59, 2017
2562017
Integrative analysis of RNA, translation, and protein levels reveals distinct regulatory variation across humans
C Cenik, ES Cenik, GW Byeon, F Grubert, SI Candille, D Spacek, ...
Genome research 25 (11), 1610-1621, 2015
2222015
Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events
H Tilgner, F Jahanbani, T Blauwkamp, A Moshrefi, E Jaeger, F Chen, ...
Nature biotechnology 33 (7), 736-742, 2015
2062015
Interplay between BRCA1 and RHAMM regulates epithelial apicobasal polarization and may influence risk of breast cancer
CA Maxwell, J Benítez, L Gómez-Baldó, A Osorio, N Bonifaci, ...
PLoS biology 9 (11), e1001199, 2011
1332011
A spatially resolved brain region-and cell type-specific isoform atlas of the postnatal mouse brain
A Joglekar, A Prjibelski, A Mahfouz, P Collier, S Lin, AK Schlusche, ...
Nature Communications 12 (1), 463, 2021
1312021
Absence of canonical marks of active chromatin in developmentally regulated genes
S Pérez-Lluch, E Blanco, H Tilgner, J Curado, M Ruiz-Romero, ...
Nature genetics 47 (10), 1158-1167, 2015
812015
Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome
H Tilgner, F Jahanbani, I Gupta, P Collier, E Wei, M Rasmussen, ...
Genome research 28 (2), 231-242, 2018
722018
Accurate identification and analysis of human mRNA isoforms using deep long read sequencing
H Tilgner, D Raha, L Habegger, M Mohiuddin, M Gerstein, M Snyder
G3: Genes, Genomes, Genetics 3 (3), 387-397, 2013
662013
Schizophrenia is defined by cell-specific neuropathology and multiple neurodevelopmental mechanisms in patient-derived cerebral organoids
M Notaras, A Lodhi, F Dündar, P Collier, NM Sayles, H Tilgner, ...
Molecular Psychiatry 27 (3), 1416-1434, 2022
652022
Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework
G Glusman, PW Rose, A Prlić, J Dougherty, JM Duarte, AS Hoffman, ...
Genome medicine 9, 1-10, 2017
582017
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