Mario dos Reis - Google Scholar

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Ziheng YangRA Fisher Professor of Statistical Genetics, University College LondonVerified email at ucl.ac.uk
Philip C. J. DonoghueProfessor of Palaeobiology, University of Bristol, School of Earth SciencesVerified email at bristol.ac.uk
Lorenz WernischProgramme leaderVerified email at mrc-bsu.cam.ac.uk
Asif U TamuriUniversity College London (UCL)Verified email at ucl.ac.uk
Konstantinos AngelisGlaxoSmithKlineVerified email at gsk.com
Anne D. YoderProfessor of Biology, Duke UniversityVerified email at duke.edu
Joseph O'ReillyEpidemiologist/Biostatistician, IGMM, University of EdinburghVerified email at igmm.ed.ac.uk
Jose Barba-MontoyaPostdoctoral researcher at Temple UniversityVerified email at temple.edu
Masami HasegawaProfessor of Life Sciences, Fudan UniversityVerified email at fudan.edu.cn
Davide PisaniProfessor of Phylogenomics. Schools of Biological & Earth Sciences. University of Bristol (UK)Verified email at bristol.ac.uk
Peter A LarsenUniversity of MinnesotaVerified email at umn.edu
C Ryan CampbellPostdoc, Duke Evolutionary AnthropologyVerified email at duke.edu
Tianqi ZhuAcademy of Mathematics and Systems Science, Chinese Academy of SciencesVerified email at amss.ac.cn
Telford MJUniversity College LondonVerified email at ucl.ac.uk
Yuttapong ThawornwattanaUniversity College LondonVerified email at ucl.ac.uk
Guojun ShengProfessor at Kumamoto University (JP), and previously RIKEN, UCL, Columbia U and Rockefeller UVerified email at kumamoto-u.ac.jp
Claudio D SternUniversity College LondoVerified email at ucl.ac.uk
Kappeler Peter MProfessor of Sociobiology & Anthropology, Göttingen UniversityVerified email at gwdg.de
Sandra Álvarez-CarreteroPhD student, Queen Mary University of LondonVerified email at qmul.ac.uk
James E. TarverUniversity of BristolVerified email at bristol.ac.uk

Mario dos Reis

Lecturer at Queen Mary University of London

Verified email at qmul.ac.uk - Homepage

Evolutionary Biology Phylogenetics Population Genetics Molecular Evolution Computational Biology


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Solving the riddle of codon usage preferences: a test for translational selection M dos Reis, R Savva, L Wernisch Nucleic acids research 32 (17), 5036-5044, 2004	526	2004
Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny M dos Reis, J Inoue, M Hasegawa, RJ Asher, PCJ Donoghue, Z Yang Proceedings of the Royal Society of London B: Biological Sciences 279 (1742 …, 2012	382	2012
Statistical properties of the branch-site test of positive selection Z Yang, M dos Reis Molecular biology and evolution 28 (3), 1217-1228, 2011	242	2011
Uncertainty in the timing of origin of animals and the limits of precision in molecular timescales M dos Reis, Y Thawornwattana, K Angelis, MJ Telford, PCJ Donoghue, ... Current Biology 25 (22), R1079-R1081, 2015	209	2015
Churchill, a zinc finger transcriptional activator, regulates the transition between gastrulation and neurulation G Sheng, M dos Reis, CD Stern Cell 115 (5), 603-613, 2003	198	2003
Unexpected correlations between gene expression and codon usage bias from microarray data for the whole Escherichia coli K‐12 genome M dos Reis, L Wernisch, R Savva Nucleic acids research 31 (23), 6976-6985, 2003	187	2003
Bayesian molecular clock dating of species divergences in the genomics era M dos Reis, PCJ Donoghue, Z Yang Nature Reviews Genetics 17 (2), 71-80, 2016	145	2016
The interrelationships of placental mammals and the limits of phylogenetic inference JE Tarver, M dos Reis, S Mirarab, RJ Moran, S Parker, JE O’Reilly, ... Genome biology and evolution 8 (2), 330-344, 2016	137	2016
Approximate Likelihood Calculation on a Phylogeny for Bayesian Estimation of Divergence Times M dos Reis, Z Yang Molecular Biology and Evolution 28 (7), 2161-2172, 2011	124	2011
Identifying changes in selective constraints: host shifts in influenza AU Tamuri, M dos Reis, AJ Hay, RA Goldstein PLoS Comput Biol 5 (11), e1000564, 2009	111	2009
Estimating the distribution of selection coefficients from phylogenetic data using sitewise mutation-selection models AU Tamuri, M dos Reis, RA Goldstein Genetics 190 (3), 1101-1115, 2012	97	2012
Dating Tips for Divergence-Time Estimation JE O’Reilly, M dos Reis, PCJ Donoghue Trends in Genetics 31 (11), 637-650, 2015	88	2015
The unbearable uncertainty of Bayesian divergence time estimation M dos Reis, Z Yang Journal of Systematics and Evolution 51 (1), 30-43, 2013	84	2013
Neither phylogenomic nor palaeontological data support a Palaeogene origin of placental mammals M dos Reis, PCJ Donoghue, Z Yang Biology letters 10 (1), 20131003, 2014	81	2014
Estimating translational selection in eukaryotic genomes M dos Reis, L Wernisch Molecular biology and evolution 26 (2), 451-461, 2009	81	2009
The impact of the rate prior on Bayesian estimation of divergence times with multiple loci M dos Reis, T Zhu, Z Yang Systematic biology 63, 555-565, 2014	66	2014
Using phylogenomic data to explore the effects of relaxed clocks and calibration strategies on divergence time estimation: Primates as a test case M dos Reis, GF Gunnell, J Barba-Montoya, A Wilkins, Z Yang, A Yoder Systematic Biology 67 (4), 594-615, 2018	59	2018
A biologist’s guide to Bayesian phylogenetic analysis FF Nascimento, M dos Reis, Z Yang Nature ecology & evolution 1 (10), 1446-1454, 2017	52	2017
Characterization of the uncertainty of divergence time estimation under relaxed molecular clock models using multiple loci T Zhu, M dos Reis, Z Yang Systematic biology 64 (2), 267-280, 2014	50	2014
Archaeology and evolution of transfer RNA genes in the Escherichia coli genome M Withers, L Wernisch, M dos Reis Rna 12 (6), 933-942, 2006	50	2006

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